Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_957513.1 | Gene: | chrna7a / 394199 | ZFINID: | ZDB-GENE-040108-3 | Length: | 509 | Species: | Danio rerio |
Alignment Length: | 486 | Identity: | 117/486 - (24%) |
---|---|---|---|
Similarity: | 202/486 - (41%) | Gaps: | 120/486 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 RLHAGLFTNYDSDVQPVFQGTPT-----NVSLEMVVTYIDIDELNGKLTTHCWLNLRWRDEERVW 112
Fly 113 QPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMA--ETQVTLSHDGHFRWMPPAVYTAYCELNM 175
Fly 176 LNWPHDKQSCKLKIGSWGLKVVLPENGTARGESLDHDDL-------VQSPEWEIVD------SRA 227
Fly 228 HFVSQDYYGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMINGLLIIVIA 292
Fly 293 AFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVL----------------------- 334
Fly 335 ---YLATGKHKRRLPEALRKLLHGHLGTWLLLSVFSTTGESQAEKT---------KEMDEHPYEE 387
Fly 388 ADEQESSPL-------GINHTEVPGAKANQF---------------------------------- 411
Fly 412 -DWALLATAVDRISFVSFSLAFLILAIRCSV 441 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 116/480 (24%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 59/213 (28%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 52/255 (20%) | ||
chrna7a | NP_957513.1 | LIC | 3..496 | CDD:273305 | 117/486 (24%) |
Neur_chan_LBD | 26..230 | CDD:280998 | 60/214 (28%) | ||
Neur_chan_memb | 237..492 | CDD:280999 | 55/264 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000891 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |