Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
Alignment Length: | 417 | Identity: | 84/417 - (20%) |
---|---|---|---|
Similarity: | 162/417 - (38%) | Gaps: | 70/417 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 APVSGPGLPLL-LQMLMGMLLMG-------LTSVPGATATADP-KNANVKA-LDRLHAGLFTNYD 63
Fly 64 SDVQPVFQGTPTNVSLEMVVTYI-DIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKS 127
Fly 128 ---SEVWTPQITLFNGDEGGLMAETQ----VTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSC 185
Fly 186 KLKIGSWG-----LKVVLPENGTARGESLDHDDLVQSPEWEIVDSRAHF----VSQDYYGYMEYT 241
Fly 242 LTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLS 306
Fly 307 NNTPLVVIFYSTSL-LYLSVSTIV--EVLVLYLATGKHKRRLPEALRKLLHGHLGTWLLLSVFST 368
Fly 369 TGESQAEKTKEMDEHPYEEADEQESSP 395 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 73/379 (19%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 39/211 (18%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 29/144 (20%) | ||
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 32/188 (17%) |
Neur_chan_memb | 274..588 | CDD:397193 | 29/144 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447347 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |