Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023533.2 | Gene: | lgc-8 / 3564870 | WormBaseID: | WBGene00013338 | Length: | 438 | Species: | Caenorhabditis elegans |
Alignment Length: | 378 | Identity: | 96/378 - (25%) |
---|---|---|---|
Similarity: | 158/378 - (41%) | Gaps: | 68/378 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 MLLMGLTSVPGATATADPKNANVKALDRLHAGLFTNYDSDVQPVFQGTPT---NVSLEMVVTYID 87
Fly 88 IDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMAETQ-- 150
Fly 151 -VTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSWG--LKVV-------LPEN---G 202
Fly 203 TARGES-LDHDDLVQS------PEWEIVDSRAHFVSQDYYGYMEYTLTAQRRSSMYTAVIYTPAS 260
Fly 261 CIVILALSAFWLPPHMGG---EKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLY 322
Fly 323 LSVSTIVEVLVLYLATGKHKR--RLPEALRKLLHGHLGTWLLLSVFSTTGESQ 373 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 92/365 (25%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 60/219 (27%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 27/124 (22%) | ||
lgc-8 | NP_001023533.2 | Neur_chan_LBD | 29..237 | CDD:280998 | 62/231 (27%) |
Neur_chan_memb | 244..>348 | CDD:280999 | 24/117 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |