Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017452660.1 | Gene: | Chrne / 29422 | RGDID: | 2353 | Length: | 547 | Species: | Rattus norvegicus |
Alignment Length: | 501 | Identity: | 110/501 - (21%) |
---|---|---|---|
Similarity: | 186/501 - (37%) | Gaps: | 144/501 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 TATADPKNANVKALDRLHAGLFTNYDSDVQPVFQGTPTNVSLEMVVTYIDIDELNGK---LTTHC 99
Fly 100 WLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEG--GLMAETQVTLSHDGHFRWM 162
Fly 163 PPAVYTAYCELNMLNWPHDKQSCKLKIGSWGLKV-------VLPENGTARGE-SLDHDDLVQSPE 219
Fly 220 WEIVDSRAHFVSQDYY---------GYME--------YTLTAQRRSSMYTAVIYTPASCIVI--L 265
Fly 266 ALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTP-----LVVIFYSTSLLYLSV 325
Fly 326 STIVEVLVLYLATGKHKRRLPEALRKLL------------------------------------- 353
Fly 354 ------------HGHLGTWLLLSVFSTTGESQ-------------AEKTKEMDEHPYEEADEQES 393
Fly 394 SPLGINHTEVPGAKANQFDWALLATAVDRISF----VSFSLAFLIL 435 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 109/500 (22%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 57/224 (25%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 48/251 (19%) | ||
Chrne | XP_017452660.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |