Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001243543.1 | Gene: | HTR3E / 285242 | HGNCID: | 24005 | Length: | 482 | Species: | Homo sapiens |
Alignment Length: | 471 | Identity: | 96/471 - (20%) |
---|---|---|---|
Similarity: | 176/471 - (37%) | Gaps: | 138/471 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 TPKIKAPVSGP-----GLPLLLQMLMGMLLMGLTSVPGATAT----------ADPKNANVKALDR 53
Fly 54 LHAGLFTNYDSDVQPVFQ-GTPTNVSLEMVVTYIDIDELNGKLTTHCWLNLRWRDEERVWQPSQY 117
Fly 118 DNITQITLKSSEVWTPQITLFN--------------GDE-------GGLMAETQVT------LSH 155
Fly 156 DGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSWGLKVVLPENGTARGESLDHDDLVQSPEW 220
Fly 221 EIVDSRAHFVSQ--------------------DYYGYMEYTLTAQRRSSMYTAVIYTPASCIVIL 265
Fly 266 ALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVE 330
Fly 331 VL----VLYLATGKHKRRLPEALRKLLHGHLGTWLLLSVFSTTGESQAEKTKEMDEHPYEEADEQ 391
Fly 392 ESSPLGINHTEVPGAK 407 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 85/431 (20%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 40/242 (17%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 36/157 (23%) | ||
HTR3E | NP_001243543.1 | Neur_chan_LBD | 70..273 | CDD:280998 | 40/228 (18%) |
Neur_chan_memb | 280..>379 | CDD:280999 | 28/113 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5722 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.760 |