| Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_036964.3 | Gene: | Chrna7 / 25302 | RGDID: | 2348 | Length: | 502 | Species: | Rattus norvegicus |
| Alignment Length: | 464 | Identity: | 108/464 - (23%) |
|---|---|---|---|
| Similarity: | 195/464 - (42%) | Gaps: | 86/464 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 53 RLHAGLFTNYDSDVQPVFQGT-PTNVSLEM-VVTYIDIDELNGKLTTHCWLNLRWRDEERVWQPS 115
Fly 116 QYDNITQITLKSSEVWTPQITLFNGDEGGLMA--ETQVTLSHDGHFRWMPPAVYTAYCELNMLNW 178
Fly 179 PHDKQSCKLKIGSW---GLKVVLPENGTARGESLDHDDLVQSPEWEIV------DSRAHFVSQDY 234
Fly 235 YGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFA 299
Fly 300 QLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVL-YLATGKHKRRLPEALRKLLHGHLGTWL-- 361
Fly 362 --------------------LLSVFSTTGESQAEKTKEM-------------------------- 380
Fly 381 ------DEHPYEEADEQESSPLGINHTEVPGAKANQF-----------DWALLATAVDRISFVSF 428
Fly 429 SLAFLILAI 437 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 107/462 (23%) |
| Neur_chan_LBD | 52..247 | CDD:280998 | 55/206 (27%) | ||
| Neur_chan_memb | 255..434 | CDD:280999 | 48/244 (20%) | ||
| Chrna7 | NP_036964.3 | LIC | 4..490 | CDD:273305 | 108/464 (23%) |
| Neur_chan_LBD | 26..230 | CDD:280998 | 56/207 (27%) | ||
| Neur_chan_memb | 237..486 | CDD:280999 | 50/249 (20%) | ||
| Essential for TMEM35A/NACHO-mediated proper subunit assembly and trafficking to cell membrane. /evidence=ECO:0000250|UniProtKB:P49582 | 260..267 | 3/6 (50%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0000891 | |
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.910 | |||||