Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_504024.2 | Gene: | acr-23 / 191606 | WormBaseID: | WBGene00000062 | Length: | 545 | Species: | Caenorhabditis elegans |
Alignment Length: | 541 | Identity: | 101/541 - (18%) |
---|---|---|---|
Similarity: | 205/541 - (37%) | Gaps: | 147/541 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 MLMGMLLMGLTSVPGATATADPKNANVKALDRLHAGLFTNYDSDVQP-VFQGTPTNVSLEM-VVT 84
Fly 85 YIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNG---DEGGLM 146
Fly 147 AETQVTLSHDGH-----FRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSWGLKVVLPE------ 200
Fly 201 -NGTARGESLDHDDLVQSPEWEIVDSRAHFVSQDY------YGYMEYTLTAQRRSSMYTAVIYTP 258
Fly 259 ASCIVILALSAFWLPPH--------------MGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNT 309
Fly 310 PLVVIFYSTSLLYLSVSTIVEVLVLYLATGKHKRRL-----PEALRKLLHGH-LGTWLLLSVFST 368
Fly 369 TGESQAEKTKE---------------------------MDEHP---------------------- 384
Fly 385 ----YEEADEQESSPLGINHTE---VPG----AKAN----------------------QFDWALL 416
Fly 417 ATAVDRISFVSFSLAFLILAI 437 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 96/522 (18%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 54/217 (25%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 38/280 (14%) | ||
acr-23 | NP_504024.2 | Neur_chan_LBD | 27..242 | CDD:280998 | 55/219 (25%) |
Neur_chan_memb | 249..529 | CDD:280999 | 41/285 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |