Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001129756.1 | Gene: | acr-19 / 191605 | WormBaseID: | WBGene00000058 | Length: | 560 | Species: | Caenorhabditis elegans |
Alignment Length: | 537 | Identity: | 120/537 - (22%) |
---|---|---|---|
Similarity: | 197/537 - (36%) | Gaps: | 177/537 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 RLHAGLFTNYDSDVQPVFQGTPTNVSLEMVV-------TYIDIDELNGKLTTHCWLNLRWRDEER 110
Fly 111 VWQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMAETQV--TLSHDGHFRWMPPAVYTAYCEL 173
Fly 174 NMLNWPHDKQSCKLKIGSWGLKVVLPENGTARGESLDHDDLVQSP-------EWEIV---DSRAH 228
Fly 229 F----VSQDYYGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMINGLLII 289
Fly 290 VIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVLYLATGKHKRRLPEA------ 348
Fly 349 -LRKLLHGHLGTWL-----------------------------------LLSVFSTTGESQAEKT 377
Fly 378 KEMD---EHPYEEADEQESSP-------LG----------------------------------- 397
Fly 398 INHTEVP--------------------------------------------GAKANQFDWALLAT 418
Fly 419 AVDRISFVSFSLAFLIL 435 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 120/537 (22%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 58/216 (27%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 58/309 (19%) | ||
acr-19 | NP_001129756.1 | LIC | 31..548 | CDD:273305 | 120/537 (22%) |
Neur_chan_LBD | 31..235 | CDD:280998 | 59/217 (27%) | ||
Neur_chan_memb | 242..>354 | CDD:280999 | 32/117 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000891 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |