Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491354.2 | Gene: | acr-6 / 191479 | WormBaseID: | WBGene00000045 | Length: | 551 | Species: | Caenorhabditis elegans |
Alignment Length: | 369 | Identity: | 100/369 - (27%) |
---|---|---|---|
Similarity: | 165/369 - (44%) | Gaps: | 53/369 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 ALDRLHAGLFTNYDSDVQP--VFQGTPT---NVSLEMVVTYIDIDE---LNGKLTTHCWLNLRWR 106
Fly 107 DEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGG--LMAETQVTLSHDGHFRWMPPAVYTA 169
Fly 170 YCELNMLNWPHDKQSCKLKIGSW---GLKVVL--------PENGTARGES-------LDHDDLVQ 216
Fly 217 SPEWEI--VDSRAH---FVSQDYYGY-MEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLP-- 273
Fly 274 PHMGGEKIMINGLLIIVIAAFLMYFAQL---LPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVLY 335
Fly 336 LATGKHKRRLPEALRKLLHGHLGTWLLLSVFSTTGESQAEKTKE 379 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 100/369 (27%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 63/228 (28%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 33/130 (25%) | ||
acr-6 | NP_491354.2 | Neur_chan_LBD | 23..244 | CDD:280998 | 63/226 (28%) |
Neur_chan_memb | 252..524 | CDD:280999 | 33/130 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000891 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |