Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510016.2 | Gene: | lgc-23 / 182622 | WormBaseID: | WBGene00007594 | Length: | 403 | Species: | Caenorhabditis elegans |
Alignment Length: | 403 | Identity: | 88/403 - (21%) |
---|---|---|---|
Similarity: | 157/403 - (38%) | Gaps: | 104/403 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 MLLMGLTSVPGATATADPKNANVKA-LDRLHAGLFTNYDSDVQPVFQGT-----PTNVSLEMVVT 84
Fly 85 YID-IDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLK-----SSEVWTPQITLFNGDEG 143
Fly 144 ------GLMAETQVTLS-HD-GHFRWMPPAVYTAYCELNMLNWPHDKQSCKLK-----------I 189
Fly 190 GSWGLKVVLPENGTARGESLDHDDLVQSPEWEIVDSRAHFVSQDYY------------------- 235
Fly 236 -GYMEYTLTAQRRSSMYTAVIYTP----ASCIVILAL--SAFWLPPHMGGEKIMINGLLIIVIAA 293
Fly 294 FLMYF---AQLLPVLSNNTPLVVIFYSTSLLYLSVSTI-VEVLVLYLATGKHK------RRLP-- 346
Fly 347 ------EALRKLL 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 85/390 (22%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 53/244 (22%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 27/123 (22%) | ||
lgc-23 | NP_510016.2 | Neur_chan_LBD | 34..262 | CDD:367255 | 52/241 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |