Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_500341.1 | Gene: | lgc-9 / 182195 | WormBaseID: | WBGene00015412 | Length: | 464 | Species: | Caenorhabditis elegans |
Alignment Length: | 429 | Identity: | 86/429 - (20%) |
---|---|---|---|
Similarity: | 168/429 - (39%) | Gaps: | 79/429 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 YDSDVQPVFQGT-PTNVSLEMVVTYIDIDELNGKLTTHCWLNL-RWRDEERVWQPSQYDNITQIT 124
Fly 125 LKSSEVWTPQITLFNG-DEGGLMAETQ--VTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCK 186
Fly 187 LKIGSWGLKVVLPENGTARGESLDHDDLVQSP---------EWEIVD---SRAHFVSQ-DYYGYM 238
Fly 239 EYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGG---EKIMINGLLIIVIAAFLMYFAQ 300
Fly 301 LLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVLYLATGKHKRRLPEALRKLLHGHLGTWLLLSV 365
Fly 366 FSTTGESQAEKTKEMDEHP--------------------------YEEADEQESSPLGINHTEVP 404
Fly 405 GAKANQFDWALLATAVD---RISFVSFSLAFLILAIRCS 440 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 84/424 (20%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 45/202 (22%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 33/210 (16%) | ||
lgc-9 | NP_500341.1 | Neur_chan_LBD | 42..245 | CDD:280998 | 46/203 (23%) |
Neur_chan_memb | 252..>347 | CDD:280999 | 19/101 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |