Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_509270.1 | Gene: | lgc-11 / 181009 | WormBaseID: | WBGene00000061 | Length: | 434 | Species: | Caenorhabditis elegans |
Alignment Length: | 449 | Identity: | 92/449 - (20%) |
---|---|---|---|
Similarity: | 175/449 - (38%) | Gaps: | 99/449 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 KNANVKALD-----RLHAGLFTNYDSDVQPVFQ-GTPTNVSLE-MVVTYIDIDELNGKLTTHCWL 101
Fly 102 NLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMAETQVTLSHDGHFRWMPPA- 165
Fly 166 -----VYTAYCELNMLNWPHDKQSCKLKIGSWG----------LKVVLPENGTARGESLDHDDLV 215
Fly 216 QSPEWEIVDSRAHFVSQDY---------YGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFW 271
Fly 272 LPPHMGG---EKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLV 333
Fly 334 LYLATGKHKRRLPEALRKLLHGHLGTWLLLSVFSTTGESQAEKTKE----------------MDE 382
Fly 383 HPYEEADEQESSPLGINHTEVPGAKANQFDWALLATAVDRISFVSFSLAFLILAIRCSV 441 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 90/443 (20%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 48/226 (21%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 36/197 (18%) | ||
lgc-11 | NP_509270.1 | Neur_chan_LBD | 36..242 | CDD:280998 | 48/223 (22%) |
Neur_chan_memb | 249..>336 | CDD:280999 | 16/90 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |