Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_509128.1 | Gene: | acr-2 / 180936 | WormBaseID: | WBGene00000042 | Length: | 575 | Species: | Caenorhabditis elegans |
Alignment Length: | 354 | Identity: | 96/354 - (27%) |
---|---|---|---|
Similarity: | 171/354 - (48%) | Gaps: | 53/354 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 TSVPGATATADP-KNANV-----KALDRLHAGLFTNYDSDVQPVFQGTPTNVSLEMVVT------ 84
Fly 85 --YIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGG--L 145
Fly 146 MAETQVTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSWGLKVVLPENGTARGE--- 207
Fly 208 --------SLDHDDLVQSPEWEIVDSRAHFVSQD--YYGYMEYTLTAQRRSSMYTAVIYTPASCI 262
Fly 263 VILALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPL----VVIFYSTSLLYL 323
Fly 324 SVSTIVEVLVLYLATGKHKRRLPEALRKL 352 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 95/347 (27%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 61/217 (28%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 27/102 (26%) | ||
acr-2 | NP_509128.1 | LIC | 54..544 | CDD:273305 | 91/335 (27%) |
Neur_chan_LBD | 60..265 | CDD:280998 | 62/219 (28%) | ||
Neur_chan_memb | 272..544 | CDD:280999 | 27/102 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |