Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006532069.1 | Gene: | Chrne / 11448 | MGIID: | 87894 | Length: | 494 | Species: | Mus musculus |
Alignment Length: | 507 | Identity: | 115/507 - (22%) |
---|---|---|---|
Similarity: | 194/507 - (38%) | Gaps: | 131/507 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 LMGMLLMGLTSVPGATATADPKNANVKALDRLHAGLFTNYDSDVQPVFQGTPTNVSLEMVVTYID 87
Fly 88 IDELNGK---LTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEG--GLMA 147
Fly 148 ETQVTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSWG--------LKVVLPENGTA 204
Fly 205 RGESLDHDDLVQSPEWEIVDSRAHFVSQDYYGYME--------YTLTAQRRSSMYTAVIYTPASC 261
Fly 262 IVI--LALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTP-----LVVIFYSTS 319
Fly 320 LLYLSVSTIVEVLVLYLATGKHKRRLPEALRKLL------------------------------- 353
Fly 354 ------------------HGHLGTWLLLSVFSTTGESQ-------------AEKTKEMDEHPYEE 387
Fly 388 ADEQESSPLGINHTEVPGAKANQFDWALLATAVDRISF----VSFSLAFLIL 435 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 109/491 (22%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 56/215 (26%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 49/251 (20%) | ||
Chrne | XP_006532069.1 | LGIC_ECD_nAChR_E | 49..239 | CDD:349831 | 47/190 (25%) |
Neur_chan_memb | 247..474 | CDD:367256 | 49/252 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |