Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_067611.2 | Gene: | Chrnd / 11447 | MGIID: | 87893 | Length: | 520 | Species: | Mus musculus |
Alignment Length: | 465 | Identity: | 116/465 - (24%) |
---|---|---|---|
Similarity: | 198/465 - (42%) | Gaps: | 66/465 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 VSGPGLPL-LLQMLMGMLLMGLTSVPGATATADPKNANVKALDRLHAGLFT--NYDSDVQPVF-Q 71
Fly 72 GTPTNVSLEMVVT-YIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQI 135
Fly 136 TLFNGDEGGLMAE--TQVTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSWGLKVVL 198
Fly 199 PENGTARGES-------------LDHDDLVQSPEWEIVDSRAHF-----VSQDYYGYMEYT--LT 243
Fly 244 AQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNN 308
Fly 309 TPLVVIFYSTSLLYLSVSTIVEVLVL---YLATGKH------KRRLPEALRKLLH------GHLG 358
Fly 359 TWLLLSVFSTTGE-SQAEK---TKEMDEHPYEEADEQESSPLGINHTEVPGAKANQFDWAL---L 416
Fly 417 ATAVDRISFV 426 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 107/436 (25%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 59/220 (27%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 46/194 (24%) | ||
Chrnd | NP_067611.2 | LIC | 1..479 | CDD:273305 | 116/465 (25%) |
Neur_chan_LBD | 28..249 | CDD:280998 | 60/230 (26%) | ||
Neur_chan_memb | 256..492 | CDD:280999 | 46/194 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |