Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033732.2 | Gene: | Chrnb2 / 11444 | MGIID: | 87891 | Length: | 501 | Species: | Mus musculus |
Alignment Length: | 463 | Identity: | 104/463 - (22%) |
---|---|---|---|
Similarity: | 189/463 - (40%) | Gaps: | 117/463 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 TNYDSDVQPVFQGTPTNVSLEMVVT---YIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNIT 121
Fly 122 QITLKSSEVWTPQITLFNGDEGGLMAE----TQVTLSHDGHFRWMPPAVYTAYCELNMLNWPHDK 182
Fly 183 QSCKLKIGSW-----GLKVVLPENGTARGESLDHDDLVQSPEWEIV---DSRAHFVSQDYYGYME 239
Fly 240 YTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPV 304
Fly 305 LSNNTPLV--VIFYSTSLLYLSVSTIVEVL--------------------------VLYLATGKH 341
Fly 342 ---KRRLPEALRKLLHGHLGTWLLL-----------------SVFSTTGESQAEK---------- 376
Fly 377 ------------TKEMDEHPYEEADEQESSPLGINHTEVPGAKANQFDWALLATAVDRISFVSFS 429
Fly 430 LAFLILAI 437 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 104/461 (23%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 53/201 (26%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 48/248 (19%) | ||
Chrnb2 | NP_033732.2 | LIC | 29..478 | CDD:273305 | 104/463 (22%) |
Neur_chan_LBD | 29..234 | CDD:280998 | 54/202 (27%) | ||
Neur_chan_memb | 241..477 | CDD:280999 | 48/253 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |