Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_056545.3 | Gene: | Chrna4 / 11438 | MGIID: | 87888 | Length: | 629 | Species: | Mus musculus |
Alignment Length: | 366 | Identity: | 102/366 - (27%) |
---|---|---|---|
Similarity: | 180/366 - (49%) | Gaps: | 43/366 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 VSGPGLPLLLQMLMGMLLMGLTSVPGATATADPKNANVKALDRLHAGLFTNYDSDVQPVFQGTPT 75
Fly 76 NVSLEMVVTY-------IDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTP 133
Fly 134 QITLFNGDEGGLMAETQVTLSH---DGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSW--- 192
Fly 193 GLKVVLPENGTARGESLDHDDLVQSPEWEIVDSRAHFVSQDY------YGYMEYTLTAQRRSSMY 251
Fly 252 TAVIYTPASCIVILALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFY 316
Fly 317 STSLLYLSVSTIVEVLVLYLATGKHKR-----RLPEALRKL 352 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 93/338 (28%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 65/213 (31%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 23/103 (22%) | ||
Chrna4 | NP_056545.3 | Neur_chan_LBD | 39..245 | CDD:280998 | 67/219 (31%) |
Neur_chan_memb | 252..620 | CDD:280999 | 23/103 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 420..459 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 503..529 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |