Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005174278.4 | Gene: | LOC101882451 / 101882451 | -ID: | - | Length: | 545 | Species: | Danio rerio |
Alignment Length: | 489 | Identity: | 115/489 - (23%) |
---|---|---|---|
Similarity: | 201/489 - (41%) | Gaps: | 121/489 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 RLHAGLFTNYDSDVQPVFQGTPTNVSLEMVVTY-------IDIDELNGKLTTHCWLNLRWRDEER 110
Fly 111 VWQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMA--ETQVTLSHDGHFRWMPPAVYTAYCEL 173
Fly 174 NMLNWPHDKQSCKLKIGSWGLKVVLPENGTARGESLD----HDDL---VQSPEWEIVD------S 225
Fly 226 RAHFVSQDYYGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMINGLLIIV 290
Fly 291 IAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVL-YLATGKHKRRLPEALRKLLH 354
Fly 355 GHLGTWLL-----------LSVFSTTGESQAEKTKEMD---------------------EHPYEE 387
Fly 388 ADEQES---SPLGINHTE---VPGAK----------------------------ANQF------- 411
Fly 412 ----DWALLATAVDRISFVSFSLAFLILAIRCSV 441 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 113/483 (23%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 57/215 (27%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 52/256 (20%) | ||
LOC101882451 | XP_005174278.4 | Neur_chan_LBD | 55..532 | CDD:332142 | 115/489 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000891 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |