DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spp and Hm13

DIOPT Version :9

Sequence 1:NP_523444.1 Gene:Spp / 33227 FlyBaseID:FBgn0031260 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_006235330.1 Gene:Hm13 / 311545 RGDID:1308946 Length:394 Species:Rattus norvegicus


Alignment Length:325 Identity:214/325 - (65%)
Similarity:267/325 - (82%) Gaps:1/325 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KKPSTPEGMAVAYSSLVVMAMLPIIFGSIRSVKLHKLKKSTGEKADTMTKKDAMYFPLIASAALF 96
            :.||||||:|:||.||::||:|||.||::|||:..: .||:.:..:|:|.:||..||:|||..|.
  Rat    24 RPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCAR-GKSSSDMPETITSRDAARFPIIASCTLL 87

  Fly    97 GLYLFFKIFQKVHINYLLTGYFFVLGVIALAHLLSPVINSLMPAAVPKVPFHILFTKGEGKHKED 161
            |||||||:|.:.:||.||:.||||||::||:|.:||.:|...||..|...:.:|||:|.|::||:
  Rat    88 GLYLFFKLFSQEYINLLLSMYFFVLGILALSHTISPFMNKFFPANFPNRQYQLLFTQGSGENKEE 152

  Fly   162 IVNYKFSTHDIVCLVISSAIGVWYLLKKHWIANNLFGLAFAINGVEMLHLNNFVTGVILLSGLFF 226
            |:||:|.|.|:|||.:||.:||||||:|||||||||||||::||||:|||||..||.|||.|||.
  Rat   153 IINYEFDTKDLVCLGLSSVVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFI 217

  Fly   227 YDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLIENGLNASNFAMLGLGDIVIPGIFIALLLRFDDS 291
            |||||||||||||||||||||||||||||||:|.||.|.||||||||||||||||||||||||.|
  Rat   218 YDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEKGLEADNFAMLGLGDIVIPGIFIALLLRFDIS 282

  Fly   292 KKRKTRIYFYSTLIAYFLGLLATIFVMHVFKHAQPALLYLVPACMGTPLLVALIRGELKVLFAYE 356
            .|:.|..|||::..||..||..|||:||:|||||||||||||||:|.|:||||::||:..:|:||
  Rat   283 LKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALVKGEVAEMFSYE 347

  Fly   357  356
              Rat   348  347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppNP_523444.1 Peptidase_A22B 71..358 CDD:282158 192/286 (67%)
Hm13XP_006235330.1 Peptidase_A22B 62..350 CDD:282158 192/286 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341016
Domainoid 1 1.000 407 1.000 Domainoid score I688
eggNOG 1 0.900 - - E1_KOG2443
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7749
Inparanoid 1 1.050 459 1.000 Inparanoid score I1513
OMA 1 1.010 - - QHG52034
OrthoDB 1 1.010 - - D1087991at2759
OrthoFinder 1 1.000 - - FOG0004278
OrthoInspector 1 1.000 - - oto97224
orthoMCL 1 0.900 - - OOG6_102328
Panther 1 1.100 - - LDO PTHR12174
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3016
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

Return to query results.
Submit another query.