DRSC/TRiP Functional Genomics Resources

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Protein Alignment lwr and UBC11

DIOPT Version :9

Sequence 1:NP_001259833.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_014984.3 Gene:UBC11 / 854517 SGDID:S000005866 Length:156 Species:Saccharomyces cerevisiae


Alignment Length:114 Identity:45/114 - (39%)
Similarity:64/114 - (56%) Gaps:2/114 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NLMIWECAIPGKKSTPWEGGLYKLRMIFKDDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 101
            :|..|...|.|.|.||:.|..:|:.:.|..:||..||..||..|::||||..||.:||.:|.|: 
Yeast    37 DLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEK- 100

  Fly   102 DWRPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIYCQNRLEYEKRVRA 150
             |.....::.|||.:|.||.|||.:.|..|.|..::..:..||.|:|.|
Yeast   101 -WSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVLA 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lwrNP_001259833.1 UQ_con 8..152 CDD:395127 45/114 (39%)
UBC11NP_014984.3 COG5078 11..156 CDD:227410 45/114 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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