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Protein Alignment lwr and Ube2r2
DIOPT Version :9
Sequence 1: | NP_001259833.1 |
Gene: | lwr / 33226 |
FlyBaseID: | FBgn0010602 |
Length: | 159 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001121045.1 |
Gene: | Ube2r2 / 689226 |
RGDID: | 1594826 |
Length: | 238 |
Species: | Rattus norvegicus |
Alignment Length: | 138 |
Identity: | 50/138 - (36%) |
Similarity: | 71/138 - (51%) |
Gaps: | 17/138 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 NLMIWECAIPGKKSTPWEGGLYKLRMIFKDDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 101
:|..||.||.|..:|.:|||.:|..:.|..|||.|||..:|...::|||:|.:|.||:|:|....
Rat 37 DLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPV 101
Fly 102 D-----------WRPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIYCQNR------LEYEKRVR 149
| |.|...::.|||.:..||||||...||..:|..::.:.| .||.:.:|
Rat 102 DDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIR 166
Fly 150 AQARAMAA 157
.|..|..|
Rat 167 KQVSATKA 174
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
lwr | NP_001259833.1 |
UQ_con |
8..152 |
CDD:395127 |
47/131 (36%) |
Ube2r2 | NP_001121045.1 |
UBCc |
11..169 |
CDD:238117 |
47/131 (36%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.000 |
|
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