DRSC/TRiP Functional Genomics Resources

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Protein Alignment lwr and Ube2t

DIOPT Version :9

Sequence 1:NP_001259833.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001265044.1 Gene:Ube2t / 67196 MGIID:1914446 Length:204 Species:Mus musculus


Alignment Length:152 Identity:47/152 - (30%)
Similarity:77/152 - (50%) Gaps:7/152 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFKDDYPTS 71
            :||.:|......:.|.|......|:....|...|.     |..:||:|.|::.|.:|..:.||..
Mouse     5 SRLKKELHMLAIEPPPGITCWQEKDQVADLRAQIL-----GGANTPYEKGVFTLEVIIPERYPFE 64

  Fly    72 PPKCKFEPPLFHPNVYPSGTVCLSL--LDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQAEAY 134
            ||:.:|..|::|||:..||.:||.:  |..:..|||::.|..:|..||.|:.|||..||..|:..
Mouse    65 PPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADIS 129

  Fly   135 TIYCQNRLEYEKRVRAQARAMA 156
            :.:..|::.:.|:.:....|.|
Mouse   130 SEFKYNKIAFLKKAKQWTEAHA 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lwrNP_001259833.1 UQ_con 8..152 CDD:395127 45/145 (31%)
Ube2tNP_001265044.1 COG5078 1..151 CDD:227410 46/150 (31%)
UBCc 5..147 CDD:238117 45/146 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..204 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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