DRSC/TRiP Functional Genomics Resources

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Protein Alignment lwr and CG14739

DIOPT Version :9

Sequence 1:NP_001259833.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_650151.1 Gene:CG14739 / 41467 FlyBaseID:FBgn0037987 Length:206 Species:Drosophila melanogaster


Alignment Length:106 Identity:28/106 - (26%)
Similarity:51/106 - (48%) Gaps:7/106 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFKDDYPTSPPKCKFEPPLFHPNV-YPSGTVCLSL 96
            |...||.:   .:.|...:.:|||::.:.:....|||.:.|:.:|...:.|||: :.:|.||:::
  Fly    36 DDMTNLNV---CLEGPLGSAYEGGIWTVNVTMPQDYPLTAPRVRFVTKILHPNIEFITGLVCMNV 97

  Fly    97 LDEEKDWRPAITIKQIL-LGIQDLLNEPNIKDPAQAEAYTI 136
            |  ::.|..:..:..|. ..:..||..||..|.....|..|
  Fly    98 L--KQAWSSSYDLVNIFETFLPQLLRYPNPHDSLNHRAAAI 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lwrNP_001259833.1 UQ_con 8..152 CDD:395127 28/106 (26%)
CG14739NP_650151.1 COG5078 12..157 CDD:227410 28/106 (26%)
UQ_con 17..152 CDD:278603 28/106 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438187
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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