DRSC/TRiP Functional Genomics Resources

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Protein Alignment lwr and Ubc6

DIOPT Version :9

Sequence 1:NP_001259833.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001246916.1 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster


Alignment Length:150 Identity:62/150 - (41%)
Similarity:83/150 - (55%) Gaps:7/150 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFK 65
            ||..|..||..:.|..::|.|.|....|..|     |:|||...|.|...||:|.|.:||.:.|.
  Fly     1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDN-----NIMIWNAVIFGPHDTPFEDGTFKLTIEFT 60

  Fly    66 DDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQ 130
            ::||..||..:|...:||||||..|.:||.:|  :..|.|...:..||..||.||::||...||.
  Fly    61 EEYPNKPPTVRFVSKVFHPNVYADGGICLDIL--QNRWSPTYDVSAILTSIQSLLSDPNPNSPAN 123

  Fly   131 AEAYTIYCQNRLEYEKRVRA 150
            :.|..:|.:||.||||||:|
  Fly   124 STAAQLYKENRREYEKRVKA 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lwrNP_001259833.1 UQ_con 8..152 CDD:395127 58/142 (41%)
Ubc6NP_001246916.1 UQ_con 8..145 CDD:395127 58/142 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438069
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24067
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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