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Protein Alignment lwr and ube2nb
DIOPT Version :9
Sequence 1: | NP_001259833.1 |
Gene: | lwr / 33226 |
FlyBaseID: | FBgn0010602 |
Length: | 159 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_956636.1 |
Gene: | ube2nb / 393313 |
ZFINID: | ZDB-GENE-040426-1291 |
Length: | 154 |
Species: | Danio rerio |
Alignment Length: | 156 |
Identity: | 47/156 - (30%) |
Similarity: | 78/156 - (50%) |
Gaps: | 8/156 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSGIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFK 65
|:|:....:.|.::...:..| |..|.|.:. |...:...|.|.:.:|:|||.:||.:...
Zfish 1 MAGLPRRIIKETQRLLAEPVP-GIKAEPDEG-----NARYFHVVIAGPQDSPFEGGTFKLELFLP 59
Fly 66 DDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQ 130
::||.:.||.:|...::||||...|.:||.:|.:: |.||:.|:.:||.||.||:.||..||..
Zfish 60 EEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDPLA 122
Fly 131 AEAYTIYCQNRLEYEKRVRAQARAMA 156
.:....:..|..:..:..|...|..|
Zfish 123 NDVAEQWKSNEAQAIETARTWTRLYA 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
lwr | NP_001259833.1 |
UQ_con |
8..152 |
CDD:395127 |
43/143 (30%) |
ube2nb | NP_956636.1 |
UBCc |
4..151 |
CDD:412187 |
45/153 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.000 |
|
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