Protein Alignment lwr and Ubc4

DIOPT Version :9

• Sequence 1: NP_001259833.1
• Gene: lwr / 33226
• FlyBaseID: FBgn0010602
• Length: 159
• Species: Drosophila melanogaster
• Sequence 2: NP_001287013.1
• Gene: Ubc4 / 39133
• FlyBaseID: FBgn0015321
• Length: 199
• Species: Drosophila melanogaster
• Alignment Length: 200
• Identity: 48/200 - (24%)
• Similarity: 88/200 - (44%)
• Gaps: 55/200 - (27%)

  Fly     1 MSGIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMI----W---ECAIPGKKSTPWEGGLY 58
            |:.:|::|:..|         |..|.|..:....::.:.:    |   ...|.|...||:|||.:
  Fly     1 MANMAVSRIKRE---------FKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKF 56

  Fly    59 KLRMIFKDDYPTSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 122
            .|.:...:.||.:|||.:|...::|||:.. :|.:||.:|.:  :|..|:|::.:||.:|.||..
  Fly    57 VLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKD--NWAAAMTLRTVLLSLQALLAA 119

  Fly   123 PNIKDPAQA-------EAYTIY--------------------CQNRLEYEKRVR------AQARA 154
            ....||..|       :.|.::                    |.::::   |:|      .:|||
  Fly   120 AEPDDPQDAVVAYQFKDKYDLFLLTAKHWTNAYAGGPHTFPDCDSKIQ---RLRDMGIDEHEARA 181

  Fly   155 MAATE 159
            :.:.|
  Fly   182 VLSKE 186

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lwr	NP_001259833.1	UQ_con	8..152	CDD:395127	42/184 (23%)
Ubc4	NP_001287013.1	COG5078	1..153	CDD:227410	41/162 (25%)
		UQ_con	8..149	CDD:278603	39/151 (26%)
		UBA_II_E2_UBCD4	163..198	CDD:270574	5/26 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45438052
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930