DRSC/TRiP Functional Genomics Resources

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Protein Alignment lwr and CG3473

DIOPT Version :10

Sequence 1:NP_476978.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster


Alignment Length:150 Identity:50/150 - (33%)
Similarity:78/150 - (52%) Gaps:12/150 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AIT-RLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFKDDY 68
            |:| |:.:|.:...:|...|..|.|.:     .|...:...:.|.|.:|:|||.:||.:...:||
  Fly     3 ALTPRIIKETQRLLEDPVPGISATPDE-----CNARYFHVLVTGPKDSPFEGGNFKLELFLPEDY 62

  Fly    69 PTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQAEA 133
            |...||.:|...:||||:...|.:||.:|.::  |.||:.|:.:||.||.||:.||..||...:.
  Fly    63 PMKAPKVRFLTKIFHPNIDRVGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDPLANDV 125

  Fly   134 YTIYCQNRLEYEKRVRAQAR 153
            ..::..|    |:|....||
  Fly   126 AELWKVN----ERRAIQLAR 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lwrNP_476978.1 UBCc_UBE2I 4..155 CDD:467418 49/149 (33%)
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 48/148 (32%)

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