DRSC/TRiP Functional Genomics Resources

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Protein Alignment lwr and Ubc2

DIOPT Version :9

Sequence 1:NP_001259833.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001260362.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster


Alignment Length:154 Identity:50/154 - (32%)
Similarity:75/154 - (48%) Gaps:7/154 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFKDD 67
            |.:..|:.:|......|.|....|.|..:     ||..|...|.|...:.:|||::.|.:.|..:
  Fly    85 GTSAKRIQKELAEITLDPPPNCSAGPKGD-----NLYEWVSTILGPPGSVYEGGVFFLDIHFSPE 144

  Fly    68 YPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQAE 132
            ||..|||..|...::|.|:...|.:||.:|.:  :|.||:||.::||.|..||.:.|..||....
  Fly   145 YPFKPPKVTFRTRIYHCNINSQGVICLDILKD--NWSPALTISKVLLSICSLLTDCNPADPLVGS 207

  Fly   133 AYTIYCQNRLEYEKRVRAQARAMA 156
            ..|.|.|||.|:::..|...:..|
  Fly   208 IATQYLQNREEHDRIARLWTKRYA 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lwrNP_001259833.1 UQ_con 8..152 CDD:395127 48/143 (34%)
Ubc2NP_001260362.1 COG5078 86..231 CDD:227410 48/151 (32%)
UQ_con 90..227 CDD:278603 48/143 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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