DRSC/TRiP Functional Genomics Resources

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Protein Alignment lwr and ube2ib

DIOPT Version :9

Sequence 1:NP_001259833.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_571426.1 Gene:ube2ib / 30622 ZFINID:ZDB-GENE-990614-17 Length:158 Species:Danio rerio


Alignment Length:153 Identity:134/153 - (87%)
Similarity:148/153 - (96%) Gaps:0/153 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFK 65
            |||||::||.:|||||||||||||||.|.||||||:|||.|||||||||.|||||||:||||:||
Zfish     1 MSGIALSRLAQERKAWRKDHPFGFVAVPMKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFK 65

  Fly    66 DDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQ 130
            ||||:|||||||||||||||||||||||||:|:|:|||||||||||||||||:|||||||:||||
Zfish    66 DDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQ 130

  Fly   131 AEAYTIYCQNRLEYEKRVRAQAR 153
            |||||||||||:||||||||||:
Zfish   131 AEAYTIYCQNRVEYEKRVRAQAK 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lwrNP_001259833.1 UQ_con 8..152 CDD:395127 127/143 (89%)
ube2ibNP_571426.1 COG5078 1..156 CDD:227410 134/153 (88%)
UQ_con 8..152 CDD:278603 127/143 (89%)
Interaction with SUMO1. /evidence=ECO:0000250 13..18 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596148
Domainoid 1 1.000 284 1.000 Domainoid score I1593
eggNOG 1 0.900 - - E2759_KOG0424
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 299 1.000 Inparanoid score I2680
OMA 1 1.010 - - QHG53499
OrthoDB 1 1.010 - - D1522509at2759
OrthoFinder 1 1.000 - - FOG0002579
OrthoInspector 1 1.000 - - otm25521
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24067
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2323
SonicParanoid 1 1.000 - - X1694
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.900

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