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Protein Alignment lwr and Ube2d1
DIOPT Version :9
Sequence 1: | NP_001259833.1 |
Gene: | lwr / 33226 |
FlyBaseID: | FBgn0010602 |
Length: | 159 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006513541.1 |
Gene: | Ube2d1 / 216080 |
MGIID: | 2384911 |
Length: | 160 |
Species: | Mus musculus |
Alignment Length: | 166 |
Identity: | 51/166 - (30%) |
Similarity: | 82/166 - (49%) |
Gaps: | 20/166 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 GIAITRLGEERKAW-----------RKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGG 56
||..:|:.....:| ::|.| |..:..|.|. :|..|:..|.|...:.::||
Mouse 2 GIMKSRVHHLSWSWGEWIQKELSDLQRDPP----AHCSAGPVGD-DLFHWQATIMGPPDSAYQGG 61
Fly 57 LYKLRMIFKDDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLN 121
::.|.:.|..|||..|||..|...::|||:..:|::||.:| ...|.||:|:.::||.|..||.
Mouse 62 VFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDIL--RSQWSPALTVSKVLLSICSLLC 124
Fly 122 EPNIKDPAQAEAYTIYCQNRLEYEKRVR--AQARAM 155
:||..||...:...||..::.:|.:..| .|..||
Mouse 125 DPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 160
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
lwr | NP_001259833.1 |
UQ_con |
8..152 |
CDD:395127 |
46/156 (29%) |
Ube2d1 | XP_006513541.1 |
UBCc |
19..159 |
CDD:381827 |
45/146 (31%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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