DRSC/TRiP Functional Genomics Resources

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Protein Alignment lwr and ube2ia

DIOPT Version :10

Sequence 1:NP_476978.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_571908.1 Gene:ube2ia / 114445 ZFINID:ZDB-GENE-010607-1 Length:157 Species:Danio rerio


Alignment Length:153 Identity:134/153 - (87%)
Similarity:148/153 - (96%) Gaps:0/153 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFK 65
            |||||::||.:|||||||||||||||.|.||||||:|||.|||||||||.|||||||:||||:||
Zfish     1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFK 65

  Fly    66 DDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQ 130
            ||||:|||||||||||||||||||||||||:|:|:|||||||||||||||||:|||||||:||||
Zfish    66 DDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQ 130

  Fly   131 AEAYTIYCQNRLEYEKRVRAQAR 153
            |||||||||||:||||||||||:
Zfish   131 AEAYTIYCQNRVEYEKRVRAQAK 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lwrNP_476978.1 UBCc_UBE2I 4..155 CDD:467418 131/150 (87%)
ube2iaNP_571908.1 UBCc_UBE2I 4..155 CDD:467418 131/150 (87%)
Interaction with SUMO1. /evidence=ECO:0000250 13..18 4/4 (100%)

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