DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ush and F21A9.2

DIOPT Version :9

Sequence 1:	NP_001259829.1	Gene:	ush / 33225	FlyBaseID:	FBgn0003963	Length:	1212	Species:	Drosophila melanogaster
Sequence 2:	NP_491204.3	Gene:	F21A9.2 / 184756	WormBaseID:	WBGene00017651	Length:	392	Species:	Caenorhabditis elegans

Alignment Length:	178	Identity:	42/178 - (23%)
Similarity:	69/178 - (38%)	Gaps:	39/178 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   757 ASEVDVKSAVSPSIAGAGGLGAGAAEAASSVETTPVAYQQLICAACGIKYTSLDNLRAHQNYYCP 821
            ::.:|:.|  ||.......|.|..:..:.|..:.|:..::.....||:.::|.....||:..||.
Worm   240 STPLDLSS--SPHAPSVPSLSASCSPTSKSSSSEPIYPERPFSCTCGVSFSSQTTYDAHKQLYCS 302

  Fly   822 KGGAVAAPAATPTDPGQLGMPKEKCGKCKTLHEIGLPCPPPVANPLAAPTVNPQPATNSLNKCPV 886
            ....|::|...|.....|....|||.||..:                 ||.:.|
Worm   303 HTTRVSSPGGGPHRNDSLRKVPEKCTKCDFV-----------------PTSSSQ----------- 339

  Fly   887 CGVVSPTAALAKKHMEMHGTVKAYRCSICQYKGNTLRGMRTHIRTHFD 934
                     |:......|.|.|.:.|.:|.|:..::||:|||:|:|.|
Worm   340 ---------LSMHIRSSHQTTKTFTCLVCGYRAFSMRGIRTHMRSHSD 378

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ush	NP_001259829.1	C2H2 Zn finger	884..904	CDD:275370	1/19 (5%)
		C2H2 Zn finger	912..932	CDD:275370	9/19 (47%)
		zf-H2C2_5	983..1007	CDD:290620
F21A9.2	NP_491204.3	C2H2 Zn finger	327..348	CDD:275368	7/57 (12%)
F21A9.2	NP_491204.3	C2H2 Zn finger	356..376	CDD:275368	9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_114804
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810