DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and COM2

DIOPT Version :10

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_011056.1 Gene:COM2 / 856867 SGDID:S000000932 Length:443 Species:Saccharomyces cerevisiae


Alignment Length:371 Identity:88/371 - (23%)
Similarity:138/371 - (37%) Gaps:104/371 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNGGIITPNPSDTEDEAPEIAVPNKKPRLEQPAM 82
            |:.:.:|:.||.:|||       :....|.|...|:            ..|:..|....||....
Yeast   131 ESDVLMVSDDELEVNE-------RFSFLKQQPLDGL------------NRISSTNNLKNLEIHEF 176

  Fly    83 SMTPPP--DQKLDDD-----QKAERVSVIMRVNSSGAVSSSSQDENSSSSTSCCSSSSNTNTSTS 140
            .:.|..  |.:|:|.     |..::|....::|..|:                 |||||.|:::.
Yeast   177 IIDPTENIDDELEDSFTTVPQSKKKVRDYFKLNIFGS-----------------SSSSNNNSNSL 224

  Fly   141 SVPPTVEDDYPEANVWRNLKFKMNRKRAAEVALPPVQTPETPVAKLVTPPAPAECIKEEEIKPIL 205
            ...|...::.....:::| :|..:||.....:||..|..|..:.......:..|  .:|....|:
Yeast   225 GCEPIQTENSSSQKMFKN-RFFRSRKSTLIKSLPLEQENEVLINSGFDVSSNEE--SDESDHAII 286

  Fly   206 TPI----------------------------YVSPVA--SSASQLILLSTVA-AQQSPTPVPKTP 239
            .|:                            .:.||:  |:.|:..||:.:: ...||:|...:|
Yeast   287 NPLKLVGNNKDISTQSIAKTTNPFKSGSDFKMIEPVSKFSNDSRKDLLAAISEPSSSPSPSAPSP 351

  Fly   240 TM----SEEKLTTRITAAQAAATRSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFICKWENC 300
            ::    |...|..|........||.| .....||..|.                   |.|  |.|
Yeast   352 SVQSSSSSHGLVVRKKTGSMQKTRGR-KPSLIPDASKQ-------------------FGC--EFC 394

  Fly   301 DKRFSRSDELSRHKRT-HTGEKKFQCSVCQKKFMRSDHLSKHVKRH 345
            |:||.|.:.|.||.|: |..||.|.|.:|.|.|.|||:|::|||.|
Yeast   395 DRRFKRQEHLKRHVRSLHMCEKPFTCHICNKNFSRSDNLNQHVKTH 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 C2H2 Zn finger 265..287 CDD:275368 3/21 (14%)
COG5048 <270..362 CDD:227381 29/77 (38%)
C2H2 Zn finger 295..317 CDD:275368 11/22 (50%)
zf-H2C2_2 309..332 CDD:463886 11/23 (48%)
C2H2 Zn finger 325..345 CDD:275368 11/19 (58%)
COM2NP_011056.1 COG5048 1..443 CDD:227381 88/371 (24%)
C2H2 Zn finger 391..412 CDD:275368 11/22 (50%)
C2H2 Zn finger 420..440 CDD:275368 11/19 (58%)

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