DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and klf11

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_012818552.1 Gene:klf11 / 733909 XenbaseID:XB-GENE-956858 Length:500 Species:Xenopus tropicalis


Alignment Length:312 Identity:104/312 - (33%)
Similarity:145/312 - (46%) Gaps:42/312 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 TEDEAPEIAVPNKKPRLEQPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVSSSSQDENSSSS 125
            |.|.:|...:|....:.:.||...|.....|.|..:..|         .:.|..:.|...:....
 Frog   170 TADSSPFRRIPEPPAQAKAPAPKCTAEKKHKPDHSKPPE---------EAPAPQNPSHTLHRPQP 225

  Fly   126 TSCCSSSSNTNTSTSSVPPTVEDDYP-EANVWRNLKFKMNRKRAAEVALPP----------VQTP 179
            ...|  :.||...... |...|:|.| |||....:...::........:|.          ::.|
 Frog   226 KHPC--TGNTEAGNQQ-PVAFENDQPKEANQLLPISVPVSSSPLLCQMIPVTGQAGVISAFIKPP 287

  Fly   180 ETPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQSPTPVPKT-PTMSE 243
            ..|::..|.|..|       :..|:..|:.:....|..:.:::|......|||...|:| ..:..
 Frog   288 SQPISNTVKPILP-------QSSPVSQPVLMGAPVSQGALMLVLPQAPIPQSPQQCPQTLVAVGN 345

  Fly   244 EKL------TTRITAAQAAA-----TRSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFICKW 297
            .||      ...|.:.|::.     :|.|.|.|:|..|.|.||||||||||.|.||||:||.|.|
 Frog   346 TKLLPLAPAPVFIASGQSSPPQMDFSRRRNYVCNFSGCRKTYFKSSHLKAHLRTHTGEKPFSCNW 410

  Fly   298 ENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDK 349
            |.|||:|:||||||||:|||||||||.|.||.::|||||||:||.:||...|
 Frog   411 EGCDKKFARSDELSRHRRTHTGEKKFACPVCDRRFMRSDHLTKHARRHMTTK 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 16/23 (70%)
C2H2 Zn finger 265..287 CDD:275368 15/21 (71%)
COG5048 <270..362 CDD:227381 58/80 (73%)
zf-H2C2_2 279..306 CDD:290200 19/26 (73%)
C2H2 Zn finger 295..317 CDD:275368 16/21 (76%)
zf-H2C2_2 309..332 CDD:290200 17/22 (77%)
zf-C2H2 323..345 CDD:278523 13/21 (62%)
C2H2 Zn finger 325..345 CDD:275368 12/19 (63%)
klf11XP_012818552.1 PHA03247 <95..366 CDD:223021 41/214 (19%)
COG5048 360..>431 CDD:227381 42/70 (60%)
C2H2 Zn finger 381..400 CDD:275368 13/18 (72%)
C2H2 Zn finger 408..430 CDD:275368 16/21 (76%)
zf-H2C2_2 422..445 CDD:372612 17/22 (77%)
zf-C2H2 436..458 CDD:333835 13/21 (62%)
C2H2 Zn finger 438..458 CDD:275368 12/19 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11507
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I4126
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48764
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 1 1.000 - - X5472
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.990

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