DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cbt and sp2

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001093452.2 Gene:sp2 / 556835 ZFINID:ZDB-GENE-080410-1 Length:610 Species:Danio rerio


Alignment Length:448 Identity:114/448 - (25%)
Similarity:172/448 - (38%) Gaps:115/448 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SPPATP-PLRENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNGGIITPNPSDTED--------E 64
            :||..| |:.::|...:....|:..:|.......:|...|    |:..|....|.|        |
Zfish   171 APPLAPAPVPQHKTVAIKPSTQKRRQNNASVNANIVRLPS----GLTLPLNVTTGDVGGAQVLTE 231

  Fly    65 APEIAVPNKKPRLEQPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVSSSSQD----ENSSSS 125
            .....|..|:.|..|.|::...|..|.......||:|..::...::..:..:..:    :|...|
Zfish   232 TAAAPVKPKRGRKRQVAIAAPAPAPQPASPPPVAEQVEALLIETTADNIIQAGNNLLIVQNPGGS 296

  Fly   126 -----------------------------TSCCSSSSNTNTSTSSVPPTVEDDYPEANVWRNLKF 161
                                         ....|::........:|.|:|:...||..... :|.
Zfish   297 QPAVVQQVQLLQQKSDQQVVQIPPQALKVVQAASATLPPVPQRQTVTPSVQVSPPEPTQVL-IKT 360

  Fly   162 KMNRKRAAEVALPPVQTPETPVAKLVTPPAPAECIK-------EEEIKPILTP-------IYVSP 212
            .....:|.::....|.||.||    .:.|.||...|       :|...|.:.|       :..:.
Zfish   361 ASGEWQAVQIQETTVTTPTTP----TSTPTPAVVTKKVQTGTRKERTLPKIAPAGGGLITLNAAQ 421

  Fly   213 VASSAS--QLILLSTVAAQQSPTPV-------------------------PKTPTMSEEKLTTRI 250
            :||:|.  |.|.::.|..|..|..:                         .:|.||..|:..|..
Zfish   422 LASAAQAVQTININGVQVQGVPVTITNAGGQQHLTVQTVPSAGLQLGSVQTQTQTMQIEQTQTLA 486

  Fly   251 TAAQA-AATRSRIYECSFPD----------------------CGKNYFKSSHLKAHQRVHTGERP 292
            ...|. ...:.|...|:.|:                      |.|.:.|:|.|:||.|:||||||
Zfish   487 LELQTQPGEKKRRMACTCPNCKDAEKKPGEVGKRKHICHIAGCEKTFRKTSLLRAHVRLHTGERP 551

  Fly   293 FICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKA 350
            |:|.|..|.|||:|||||.||.|||||:|:|:|:.|||:|||||||:||.|.|...|:
Zfish   552 FVCNWVFCGKRFTRSDELQRHARTHTGDKRFECNKCQKRFMRSDHLTKHYKTHINTKS 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 10/45 (22%)
C2H2 Zn finger 265..287 CDD:275368 10/43 (23%)
COG5048 <270..362 CDD:227381 51/81 (63%)
zf-H2C2_2 279..306 CDD:290200 17/26 (65%)
C2H2 Zn finger 295..317 CDD:275368 14/21 (67%)
zf-H2C2_2 309..332 CDD:290200 15/22 (68%)
zf-C2H2 323..345 CDD:278523 15/21 (71%)
C2H2 Zn finger 325..345 CDD:275368 14/19 (74%)
sp2NP_001093452.2 C2H2 Zn finger 524..546 CDD:275368 8/21 (38%)
COG5048 <529..>584 CDD:227381 35/54 (65%)
zf-H2C2_2 539..565 CDD:290200 17/25 (68%)
C2H2 Zn finger 554..576 CDD:275368 14/21 (67%)
zf-H2C2_2 568..591 CDD:290200 15/22 (68%)
zf-C2H2 582..604 CDD:278523 15/21 (71%)
C2H2 Zn finger 584..604 CDD:275368 14/19 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.040

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