DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and sp2

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_031749963.1 Gene:sp2 / 549560 XenbaseID:XB-GENE-968274 Length:588 Species:Xenopus tropicalis


Alignment Length:392 Identity:106/392 - (27%)
Similarity:163/392 - (41%) Gaps:106/392 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PPATP-PLRENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNG-----GIITPNPSDTEDEAPEI 68
            ||:.| |...|:.::.....:...||:|:|...|:..:|...|     .::.|. :||:    .:
 Frog   241 PPSIPVPGSPNQDQVETVVIETTAENILQAGNNLLIVQSPSTGQHAVLQVMQPK-TDTQ----LV 300

  Fly    69 AVPNKKPRLEQPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVSSSSQDENSSSSTSCCSSSS 133
            .:|.:..|:.|.|.:..|...||.....:.....:.:| .:||.|.:....|..::...|.||:.
 Frog   301 QIPQQALRVVQAASATLPTVPQKPVQTPECTPTQLYIR-TASGDVQAVVMQEAPAAPQPCSSSAG 364

  Fly   134 NTNTSTSSVPPTVEDDYPEANVWRNLKFKMNRKRAAEVALPPVQTP---ETPVAKLVTPPAPAEC 195
            ...|.|.:                                 ||:.|   |..:||:    |||..
 Frog   365 PIVTQTGT---------------------------------PVKNPLRKERSLAKI----APAGS 392

  Fly   196 IKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQ--SPTPVPKTPTMSEEKLTTRITA------ 252
            :.......:.|       |:...|.|.::.|:.|.  :.|..|..|.:|.:.:::...|      
 Frog   393 LINLNTTQLTT-------AAQGIQTININGVSMQMPVTITSTPGQPQLSVQNVSSGNVAISGLSP 450

  Fly   253 --------------AQAAATRSRI----------------------YECSFPDCGKNYFKSSHLK 281
                          .|....|.|:                      :.|..|:||:.:.|:|.|:
 Frog   451 SQIQLQMEQALSGELQPGEKRRRVACTCPNCKDGEKGRWGPPGRKRHVCHIPECGRTFRKTSLLR 515

  Fly   282 AHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTH---TGEKKFQCSVCQKKFMRSDHLSKHVK 343
            ||.|:|||||||:|.|..|.|||:|||||.||.|||   ||:|:|:|..|||:|.||||:|||.|
 Frog   516 AHVRLHTGERPFVCNWGFCTKRFTRSDELQRHARTHTGVTGDKRFECPQCQKRFTRSDHVSKHFK 580

  Fly   344 RH 345
            .|
 Frog   581 TH 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 10/23 (43%)
C2H2 Zn finger 265..287 CDD:275368 10/21 (48%)
COG5048 <270..362 CDD:227381 49/79 (62%)
zf-H2C2_2 279..306 CDD:290200 17/26 (65%)
C2H2 Zn finger 295..317 CDD:275368 14/21 (67%)
zf-H2C2_2 309..332 CDD:290200 15/25 (60%)
zf-C2H2 323..345 CDD:278523 14/21 (67%)
C2H2 Zn finger 325..345 CDD:275368 13/19 (68%)
sp2XP_031749963.1 SP2_N 27..498 CDD:411776 55/306 (18%)
C2H2 Zn finger 502..521 CDD:275368 9/18 (50%)
zf-H2C2_2 514..540 CDD:404364 17/25 (68%)
C2H2 Zn finger 529..551 CDD:275368 14/21 (67%)
zf-H2C2_2 543..571 CDD:404364 16/27 (59%)
C2H2 Zn finger 562..582 CDD:275368 13/19 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.130

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