DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and Klf13

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_067341.2 Gene:Klf13 / 50794 MGIID:1354948 Length:289 Species:Mus musculus


Alignment Length:234 Identity:94/234 - (40%)
Similarity:114/234 - (48%) Gaps:36/234 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 AAEVALPPVQTPETPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQSP 232
            ||..|..|.:.|..|.|   .||.|......:...|...|   ||..|...       .|.:|.|
Mouse    87 AARKARTPCRLPPAPPA---PPPGPEPASPGQAGAPAAPP---SPAWSEPE-------AALEQEP 138

  Fly   233 TPVPKTPTMSEEKLTTRITAAQAAA---TRSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFI 294
            .|...    .|..|..|....::.|   :..|.::|.:..|.|.|.||||||||.|.|||||||.
Mouse   139 GPAGS----GEPGLRQRGRRGRSRADLESPQRKHKCHYAGCEKVYGKSSHLKAHLRTHTGERPFA 199

  Fly   295 CKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKANGVNRHVSL 359
            |.|:.|:|:|:|||||:||.|||||||||.|.:|:|:|||||||:||.:||       .|.|..:
Mouse   200 CSWQECNKKFARSDELARHYRTHTGEKKFSCPICEKRFMRSDHLTKHARRH-------ANFHPGM 257

  Fly   360 ANNNTSASVAASLCDASLHLRAIAPAGSSASSSPISSAS 398
            .......|...||.|.|         .|.|||..||.||
Mouse   258 LQRRGGGSRTGSLSDYS---------RSDASSPTISPAS 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 13/23 (57%)
C2H2 Zn finger 265..287 CDD:275368 13/21 (62%)
COG5048 <270..362 CDD:227381 56/91 (62%)
zf-H2C2_2 279..306 CDD:290200 18/26 (69%)
C2H2 Zn finger 295..317 CDD:275368 13/21 (62%)
zf-H2C2_2 309..332 CDD:290200 16/22 (73%)
zf-C2H2 323..345 CDD:278523 13/21 (62%)
C2H2 Zn finger 325..345 CDD:275368 12/19 (63%)
Klf13NP_067341.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..54
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..168 24/97 (25%)
COG5048 <163..253 CDD:227381 56/96 (58%)
C2H2 Zn finger 170..192 CDD:275368 13/21 (62%)
C2H2 Zn finger 200..222 CDD:275368 13/21 (62%)
C2H2 Zn finger 230..250 CDD:275368 12/19 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..289 16/54 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43603
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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