DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and gl

DIOPT Version :10

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster


Alignment Length:119 Identity:31/119 - (26%)
Similarity:43/119 - (36%) Gaps:34/119 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FLAKLLLVSYNSSRPFQLRLVKMLCIDQPYTRAI---LHHCKTVLRRNQPTLLNLSLTIPEVITK 71
            ||.||:..|.|  |....|:|.|........:||   ..||...|...:|..|.           
  Fly    37 FLIKLIENSMN--RSAGKRVVLMTGSTGKAAKAIGGRTLHCTIGLPNEKPEDLE----------- 88

  Fly    72 CFVSLKIEYKFNLYQPFLFDTTIEACQFLRLRPVDPLSTYLYNVFEETLPMVVR 125
               |||       .|.|::.||       ||..:|.: |.|.:...:...||::
  Fly    89 ---SLK-------SQAFIYATT-------RLIIIDEI-TLLASWHLDATDMVLK 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 C2H2 Zn finger 265..287 CDD:275368
COG5048 <270..362 CDD:227381
C2H2 Zn finger 295..317 CDD:275368
zf-H2C2_2 309..332 CDD:463886
C2H2 Zn finger 325..345 CDD:275368
glNP_001262708.1 COG5048 <426..571 CDD:227381
C2H2 Zn finger 439..459 CDD:275368
C2H2 Zn finger 467..487 CDD:275368
C2H2 Zn finger 495..515 CDD:275368
C2H2 Zn finger 523..543 CDD:275368
C2H2 Zn finger 551..571 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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