DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and dar1

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster


Alignment Length:393 Identity:103/393 - (26%)
Similarity:151/393 - (38%) Gaps:115/393 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PEIAVPNKKPRLEQPAMSMTPPPDQK---LDDDQKAERVSVIMRVNSSGAVSSSSQDE------- 120
            |.:|:|...|.::...:.:.....|:   ..::..:....:....::||..||..|..       
  Fly   356 PSLALPGLPPAVDVVELQLQQQHQQQQHLQHNNSSSSSPKLATPGDNSGNTSSYQQQYASQLVSG 420

  Fly   121 ------NSSSSTS---CCSSSSNTNTSTSSVPPTVEDD-------YPEANVWRNLKFKMNRKRAA 169
                  |.|||.|   ...||.:.:|.....||:....       .|.|.:....:.:..:::..
  Fly   421 SGGGYLNGSSSNSYGYSWHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQQL 485

  Fly   170 EVALPPV--QTPETPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQSP 232
            :...||.  .||.|..:.:.:  :.|.........|.|||....|.:..:|.:...:..|||:..
  Fly   486 QQLCPPAAPSTPSTSSSSISS--SSASSASRHMFVPPLTPPSSDPGSPGSSMVAAAAAAAAQRRT 548

  Fly   233 TPVP------------KTPTM---------SEEKLTTRI-------------------------- 250
            ||.|            ..||:         |....||.:                          
  Fly   549 TPPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQP 613

  Fly   251 ---------------------TAAQAAATRS-----------------RIYECSFPDCGKNYFKS 277
                                 |||..|:..|                 ||:.|.|..|.|.|.||
  Fly   614 PPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKVYTKS 678

  Fly   278 SHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHV 342
            ||||||||:||||:|:.|:|..|:.||:|||||:||.|.|||.|.|:|.||::.|.|||||:.|:
  Fly   679 SHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHM 743

  Fly   343 KRH 345
            |||
  Fly   744 KRH 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 15/23 (65%)
C2H2 Zn finger 265..287 CDD:275368 15/21 (71%)
COG5048 <270..362 CDD:227381 49/76 (64%)
zf-H2C2_2 279..306 CDD:290200 17/26 (65%)
C2H2 Zn finger 295..317 CDD:275368 13/21 (62%)
zf-H2C2_2 309..332 CDD:290200 13/22 (59%)
zf-C2H2 323..345 CDD:278523 12/21 (57%)
C2H2 Zn finger 325..345 CDD:275368 11/19 (58%)
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 40/82 (49%)
C2H2 Zn finger 671..688 CDD:275368 13/16 (81%)
zf-H2C2_2 680..707 CDD:290200 17/26 (65%)
C2H2 Zn finger 696..718 CDD:275368 13/21 (62%)
zf-H2C2_2 710..735 CDD:290200 14/24 (58%)
C2H2 Zn finger 726..746 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455414
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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