DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and bowl

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001245861.1 Gene:bowl / 33602 FlyBaseID:FBgn0004893 Length:744 Species:Drosophila melanogaster


Alignment Length:341 Identity:86/341 - (25%)
Similarity:122/341 - (35%) Gaps:77/341 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 TEDEAPEI------AVPNKKP-RLEQPAMSMTPPPDQKLDDDQKAERVSV--------IMRVNSS 110
            ||..:.||      |:|..:| |::|...||.            |...:|        ..|...|
  Fly     3 TESSSSEISGGGGGAIPMLRPSRMDQFMNSMA------------AAAAAVGGGGLPGAADRNGGS 55

  Fly   111 GAVSSSSQDENSSSSTSCCSSSSNTNTS---------------------------------TSSV 142
            |.....||:.|..|..|..|..|...|.                                 |..|
  Fly    56 GGSDGGSQNGNGDSRNSSASRISAYETQLAYQQHLAGLHGPPPPPPPSHHREISAFVPVLPTGKV 120

  Fly   143 PPTVEDDYPEANVWRNLKFKMNRKRAAEVALPPVQTPETPVAKLVTPP----APAECIKEEEIKP 203
            .|....:|....:..:.:.::..:.||..|....:.|..|....|.||    .||..    ...|
  Fly   121 RPGSNSNYEIIAMMADKRKELALREAAAAAAMLGRGPGGPGGPGVPPPGVLYGPAGV----PPPP 181

  Fly   204 ILTPIYVSPVASSASQLILLSTVAAQQSPTPVPKTPTMSEEKLTTRITAAQAAATR-SRIYECSF 267
            .||....||..:.:   ......||..:..|....|.| ...|..|:..|...|:| .:.:.|.|
  Fly   182 YLTGPGPSPTGAGS---FPFPPGAAAAALFPPGLGPGM-HAGLDRRLLRAPGRASRPKKQFICKF 242

  Fly   268 PDCGKNYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKF 332
              |.:.:.||.:|..|:|.||.|||:.|  :.|.|.|.|.|.|..|:..|:.||.|:|:.|.|.|
  Fly   243 --CNRQFTKSYNLLIHERTHTDERPYSC--DICGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGF 303

  Fly   333 MRSDHLSKHVKRHNKD 348
            .:|..|:.|...|.::
  Fly   304 CQSRTLAVHKILHMEE 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 8/23 (35%)
C2H2 Zn finger 265..287 CDD:275368 8/21 (38%)
COG5048 <270..362 CDD:227381 31/79 (39%)
zf-H2C2_2 279..306 CDD:290200 12/26 (46%)
C2H2 Zn finger 295..317 CDD:275368 8/21 (38%)
zf-H2C2_2 309..332 CDD:290200 9/22 (41%)
zf-C2H2 323..345 CDD:278523 8/21 (38%)
C2H2 Zn finger 325..345 CDD:275368 7/19 (37%)
bowlNP_001245861.1 COG5048 <232..372 CDD:227381 34/92 (37%)
C2H2 Zn finger 240..260 CDD:275368 8/21 (38%)
zf-H2C2_2 252..277 CDD:290200 12/26 (46%)
C2H2 Zn finger 268..288 CDD:275368 8/21 (38%)
zf-H2C2_2 280..303 CDD:290200 9/22 (41%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
zf-C2H2 322..344 CDD:278523
C2H2 Zn finger 324..344 CDD:275368
zf-H2C2_2 336..361 CDD:290200
C2H2 Zn finger 352..372 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
11.030

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