DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and Klf11

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001032431.2 Gene:Klf11 / 313994 RGDID:1306646 Length:501 Species:Rattus norvegicus


Alignment Length:522 Identity:147/522 - (28%)
Similarity:203/522 - (38%) Gaps:185/522 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SPPATPP----------LRENKLEIVAKDEQQ-----VNENLLKAKLKLV-----AQKSQ----- 48
            ||.:|.|          :.|:.||....|.::     :.:..::|...||     .|:||     
  Rat     3 SPGSTGPGDARAADIMDICESILERKRHDSERSTCSILEQTDIEAVEALVCMSSWGQRSQVRPLT 67

  Fly    49 ---KNGGIITPNPSDTEDEAPEI-----------AVPNKKPRLEQPAMSMTPPPDQKLDDDQKAE 99
               .:|.:.|....||  .||::           ..|.:.|.|.:|  :.||.|.|.        
  Rat    68 PVSDSGDVTTAVLMDT--AAPDLPKDFHSFSTLCITPPQSPELMEP--TGTPVPSQV-------- 120

  Fly   100 RVSVIMRVNSSGAVS--------------SSSQDENSSSSTSC--CSSSSNTNTSTSSVP----- 143
                   :||.|.::              |..:....||.:||  ..:|...:|..|..|     
  Rat   121 -------INSQGCMATALPPSPTGGPRTLSKGEPPEPSSESSCRAVMTSVIRHTGESPAPTCFPT 178

  Fly   144 -PTVED-------------DYPEA------------------------------------NVW-- 156
             ||.|.             |:.||                                    .||  
  Rat   179 GPTQEQPASDSRGGQDPLLDHLEALQDTRLADGLLVTNLVSCQPCLHKSGGLFPIDKGQQTVWPT 243

  Fly   157 -------RNLKFKMNRKR----AAEVALPPVQTPETPVA-------KLVTPPA--PAECIKEEEI 201
                   :|.:..::||.    :..|:.|||.....|||       ..:.||.  ||     ..|
  Rat   244 AVQTCLPKNPESDLSRKTTPFISVPVSSPPVLCQMIPVAGQNGMLSAFLRPPTQLPA-----GTI 303

  Fly   202 KPIL-------TPIYVSPVASSASQLILLSTVAAQQSPTPVP-----KTPTMSEEKL-------- 246
            ||||       .|:::.|.....:.:::|     .||..|.|     ....:...||        
  Rat   304 KPILPQAASMSQPVFMGPPVPQGTVMLVL-----PQSTFPQPAACPSSVMAIGNTKLLPLAPAPV 363

  Fly   247 ---TTRITAAQAAATRSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSD 308
               :::..|.|...:|.|.|.|:||.|.|.||||||||||.|.||||:||.|.|:.|||:|:|||
  Rat   364 FVASSQNCAPQVDFSRRRNYVCNFPGCRKTYFKSSHLKAHLRTHTGEKPFTCSWDGCDKKFARSD 428

  Fly   309 ELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRH-NKDKANGVNRHVSLANNNTSASVAASL 372
            |||||:|||||||||.|.||.::|||||||:||.:|| ...|..|....|...|..|.|....|:
  Rat   429 ELSRHRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRITLAESPRSI 493

  Fly   373 CD 374
            .:
  Rat   494 LE 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 17/23 (74%)
C2H2 Zn finger 265..287 CDD:275368 16/21 (76%)
COG5048 <270..362 CDD:227381 59/92 (64%)
zf-H2C2_2 279..306 CDD:290200 18/26 (69%)
C2H2 Zn finger 295..317 CDD:275368 15/21 (71%)
zf-H2C2_2 309..332 CDD:290200 17/22 (77%)
zf-C2H2 323..345 CDD:278523 13/21 (62%)
C2H2 Zn finger 325..345 CDD:275368 12/19 (63%)
Klf11NP_001032431.2 KLF11_N 40..383 CDD:409242 72/371 (19%)
COG5048 381..>438 CDD:227381 40/56 (71%)
C2H2 Zn finger 388..407 CDD:275368 14/18 (78%)
C2H2 Zn finger 415..437 CDD:275368 15/21 (71%)
zf-C2H2 443..465 CDD:395048 13/21 (62%)
C2H2 Zn finger 445..465 CDD:275368 12/19 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11381
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I4188
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45675
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5472
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.960

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