DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and Klf1

DIOPT Version :10

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_006255316.1 Gene:Klf1 / 304666 RGDID:1309398 Length:381 Species:Rattus norvegicus


Alignment Length:373 Identity:105/373 - (28%)
Similarity:142/373 - (38%) Gaps:113/373 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DMDTLL-----PSPPATP----------PLRE----NKLEIVAKDEQQVNENLLKAKLKLVAQKS 47
            |.|..|     |.||:||          |:.:    ..|...|.....|...|          .|
  Rat    92 DPDLFLTNFSGPEPPSTPRTCALAPSGGPVAQFAPPESLSAYAGGPGLVTGPL----------GS 146

  Fly    48 QKNGGII--TPNPSDTEDEAPEIAVPNKKPRLEQPAMSMTPPPDQKLDDDQKAERVSVIMRVNSS 110
            :::.|..  ||.|...|.....:..|...|: .|||.|                         .|
  Rat   147 EEHAGWAHPTPRPPTPEPFVAPVLAPGLAPK-AQPAFS-------------------------ES 185

  Fly   111 GAVSSSSQDENSSSSTSCCSSSSNTNTSTSSVPPTVEDDYP---EANVWRNLKFKMNRKRAAEVA 172
            .|||:......:..:.          .:..|.|..:...||   .|..::. .|::.|..||   
  Rat   186 RAVSAGGFFPRAGLAV----------PAAPSAPYGLLSGYPALYPAPQYQG-HFQLFRGLAA--- 236

  Fly   173 LPPVQTPETPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQSPTPVPK 237
                     |.|....||:...|:....:.   |.:..:.:|..|.    ||..||.      ||
  Rat   237 ---------PSAGPTAPPSFLNCLGPGAVG---TELGATAIAGDAG----LSPGAAP------PK 279

  Fly   238 TPTMSEEKLTTRITAAQAAATRSRIYECSFPDCGKNYFKSSHLKAHQRVHT-----GERPFICKW 297
                     .:|.|.||   .|...:.|....|||:|.||||||||.|.||     ||:|:.|.|
  Rat   280 ---------RSRRTLAQ---KRQAAHTCGHEGCGKSYTKSSHLKAHLRTHTAPCPSGEKPYACSW 332

  Fly   298 ENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRH 345
            :.|:.||:|||||:||.|.|||.:.|.|.:|.:.|.|||||:.|:|||
  Rat   333 DGCNWRFARSDELTRHYRKHTGHRPFCCGLCPRAFSRSDHLALHMKRH 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 C2H2 Zn finger 265..287 CDD:275368 14/21 (67%)
COG5048 <270..362 CDD:227381 47/81 (58%)
C2H2 Zn finger 295..317 CDD:275368 13/21 (62%)
zf-H2C2_2 309..332 CDD:463886 11/22 (50%)
C2H2 Zn finger 325..345 CDD:275368 10/19 (53%)
Klf1XP_006255316.1 KLF1_N 28..293 CDD:409227 57/284 (20%)
COG5048 <297..>380 CDD:227381 45/82 (55%)
C2H2 Zn finger 298..317 CDD:275368 13/18 (72%)
C2H2 Zn finger 330..352 CDD:275368 13/21 (62%)
C2H2 Zn finger 360..380 CDD:275368 10/19 (53%)

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