DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and klf1

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_571011.1 Gene:klf1 / 30104 ZFINID:ZDB-GENE-980526-55 Length:365 Species:Danio rerio


Alignment Length:379 Identity:109/379 - (28%)
Similarity:155/379 - (40%) Gaps:76/379 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDMDT--LLPSPPATPPLRENKLEIVAKDEQQVN-------ENLLKAKLKLVAQKSQKNGGIITP 56
            :|:|:  |..||.:..|.:      ...||.|.:       |.||.....:..::|  |....||
Zfish    28 LDLDSKDLHQSPASYKPSQ------FLTDEHQDDSEGCWDMEFLLSDWASMSPERS--NSQNYTP 84

  Fly    57 NPSDTEDE-----------AP-----EIAVPNKKPRLEQP--AMSMTPPPDQKLD----DDQKAE 99
            .....:|:           ||     ::.|.:....|..|  .:|.:.|||.:.:    |.|   
Zfish    85 QRPTLQDQLHSPDLYQELNAPKPNRHQVCVASSLAELLPPEATLSSSLPPDLQFNCGFLDQQ--- 146

  Fly   100 RVSVIMRVNSSGAVSSSSQDENSSSSTSCCSSSSNTNTSTSSVPPTVEDDYPEANVWRNLKFKMN 164
                        |..|.||.|| ....|....:||.|..:|.           ..:.::..|...
Zfish   147 ------------AAKSYSQAEN-PQQFSAFPVTSNVNRDSSM-----------GKMGKSWDFGHY 187

  Fly   165 RKRAAEVALPP---VQTPETPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTV 226
            .:.|..::.|.   |||....:..:|.||............|.|.....:.|.....|....|| 
Zfish   188 YQPAPLISFPDSKFVQTQGITMETVVFPPHHHYNFIPSYSHPRLYQQQANYVHRPPPQSHFPST- 251

  Fly   227 AAQQSPTPVPKTPTMSEEKLTTRITAAQAAATRSRIYECSFPDCGKNYFKSSHLKAHQRVHTGER 291
               ||..|....|....|....|....:..||   ::.|.:|.|.|.|.||||||||.|.||||:
Zfish   252 ---QSMVPDSTVPPAGLESKRIRRGLVKRKAT---VHSCEYPGCQKTYTKSSHLKAHLRTHTGEK 310

  Fly   292 PFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRH 345
            |:.|.|:.|..:|:|||||:||.|.|||:|.::|.:|.:.|.|||||:.|:|||
Zfish   311 PYHCTWDGCGWKFARSDELTRHFRKHTGQKPYECLLCHRAFSRSDHLALHMKRH 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 14/23 (61%)
C2H2 Zn finger 265..287 CDD:275368 14/21 (67%)
COG5048 <270..362 CDD:227381 45/76 (59%)
zf-H2C2_2 279..306 CDD:290200 15/26 (58%)
C2H2 Zn finger 295..317 CDD:275368 12/21 (57%)
zf-H2C2_2 309..332 CDD:290200 11/22 (50%)
zf-C2H2 323..345 CDD:278523 10/21 (48%)
C2H2 Zn finger 325..345 CDD:275368 10/19 (53%)
klf1NP_571011.1 COG5048 287..>344 CDD:227381 34/56 (61%)
C2H2 Zn finger 287..306 CDD:275368 13/18 (72%)
zf-H2C2_2 298..>315 CDD:290200 11/16 (69%)
C2H2 Zn finger 314..336 CDD:275368 12/21 (57%)
zf-H2C2_2 328..353 CDD:290200 12/24 (50%)
C2H2 Zn finger 344..364 CDD:275368 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12167
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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