DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cbt and EGR3

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_005273482.1 Gene:EGR3 / 1960 HGNCID:3240 Length:442 Species:Homo sapiens


Alignment Length:443 Identity:110/443 - (24%)
Similarity:155/443 - (34%) Gaps:146/443 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LPSPPATPPLRENKLEIVAKDEQQ--------VNENLLKAKLKLVAQKSQKNGGIITPNPSDTED 63
            ||:||              ::|||        |.||::                           
Human    87 LPAPP--------------REEQQCFSRARACVCENVM--------------------------- 110

  Fly    64 EAPEIAVPNKKPRLE-QPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSG--AVSSSSQ--DENSS 123
               :|.:.|:||..| ..:.|..|.|..|              .|...|  |..|.|.  .:|..
Human   111 ---DIGLTNEKPNPELSYSGSFQPAPGNK--------------TVTYLGKFAFDSPSNWCQDNII 158

  Fly   124 SSTSC-------CSSSSNTNTSTSSV--PP--TVEDDYPEANVWRN------------------- 158
            |..|.       .|.:.:|.|||:|:  ||  .||..||....:.|                   
Human   159 SLMSAGILGVPPASGALSTQTSTASMVQPPQGDVEAMYPALPPYSNCGDLYSEPVSFHDPQGNPG 223

  Fly   159 LKFKMNRKRAAEVALPPVQTPETPVAKLVTPPAPAECIKEEEIKPI--LTPIYVSPVASSASQLI 221
            |.:.....::|:.||.....|..|...|...|.....|.|.  ||.  :.||.|:|     ..:.
Human   224 LAYSPQDYQSAKPALDSNLFPMIPDYNLYHHPNDMGSIPEH--KPFQGMDPIRVNP-----PPIT 281

  Fly   222 LLSTVAAQQSPTPVPKTPTMSEEKLTTRITAAQAAATR-------SRIYECSFPDCGKNYFKSSH 279
            .|.|:.|.:.....|...::.:..||.:....:....|       .|.:.|....|.:.:.:|..
Human   282 PLETIKAFKDKQIHPGFGSLPQPPLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDE 346

  Fly   280 LKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKR 344
            |..|.|:|||.:||.|:  .|.:.|||||.|:.|.|||||||.|.|..|.:||.|||...:|.|.
Human   347 LTRHLRIHTGHKPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKI 409

  Fly   345 HNKDKANGVNRHVSLANNNTSASVAASLCDASLHLRAIAPAGSSASSSPISSA 397
            |.|.|.....:                           ..|.|::|:.|:|.|
Human   410 HLKQKEKKAEK---------------------------GGAPSASSAPPVSLA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 6/23 (26%)
C2H2 Zn finger 265..287 CDD:275368 6/21 (29%)
COG5048 <270..362 CDD:227381 39/91 (43%)
zf-H2C2_2 279..306 CDD:290200 11/26 (42%)
C2H2 Zn finger 295..317 CDD:275368 10/21 (48%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
zf-C2H2 323..345 CDD:278523 10/21 (48%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
EGR3XP_005273482.1 DUF3446 142..202 CDD:288757 19/59 (32%)
COG5048 324..>388 CDD:227381 28/65 (43%)
zf-C2H2 330..354 CDD:278523 6/23 (26%)
C2H2 Zn finger 332..354 CDD:275368 6/21 (29%)
zf-H2C2_2 346..371 CDD:290200 11/26 (42%)
COG5048 358..>431 CDD:227381 34/101 (34%)
C2H2 Zn finger 362..382 CDD:275368 10/21 (48%)
zf-H2C2_2 374..399 CDD:290200 14/24 (58%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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