DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and klf-3

DIOPT Version :10

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001022205.1 Gene:klf-3 / 191713 WormBaseID:WBGene00003480 Length:315 Species:Caenorhabditis elegans


Alignment Length:381 Identity:113/381 - (29%)
Similarity:168/381 - (44%) Gaps:108/381 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLPSPPATPPLRE----NKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNGGIITPNPSDTEDEAP 66
            :|....:.||..|    :..|.:.:|..:.|...::|..:.:|...     :|||||. .:..||
 Worm     1 MLKMEQSAPPRYEEDWADVYEFIERDSSRKNVPAIEAIERRLAFSP-----LITPNPG-AKQFAP 59

  Fly    67 EIAVPNKK-PRLEQP-------AMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVSSSSQDENSS 123
             |.||.:: ||:..|       ..|..|||.|::                               
 Worm    60 -IHVPGREPPRMLLPPTPHFQAPFSPHPPPVQQV------------------------------- 92

  Fly   124 SSTSCCSSSSNTNTSTSSVPPTVEDDYPE--------ANVW-------RNLKFKMNRKRAAEVAL 173
                       .:.|....||:.| .|||        .|.:       ||..:.......:.|.|
 Worm    93 -----------PSYSPPHAPPSYE-TYPEVYYPPHIICNPYDVPTTSDRNPPYYTEVTTVSAVTL 145

  Fly   174 PPVQTPETPVAKLVTPPAPAE-----------CIKEEEIKPILTPIYVSPVASSASQLILLSTVA 227
            ..: ||  |..|:.|||:..|           .||.|        |.:.|:..:..   |.||.:
 Worm   146 HSM-TP--PTHKIETPPSSPENSFGPLASQLPAIKME--------IPMHPLPHNGE---LDSTRS 196

  Fly   228 AQQSPTPVPKTPTMSEEKLTTRITAAQAAATRSR--IYECSFPDCGKNYFKSSHLKAHQRVHTGE 290
            :..|.|...::|...:    :||.:.:...|..:  ::.|::|.|.|.|.||||||||:|.|:||
 Worm   197 SPSSTTSSERSPLQRK----SRIESNKRNPTDKKFVVHACTYPGCFKKYSKSSHLKAHERTHSGE 257

  Fly   291 RPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHN 346
            :||:|||:||..:|:|||||:||.|.|||:|.|:||:|.:.|.||||||.|:|||:
 Worm   258 KPFVCKWQNCSWKFARSDELTRHMRKHTGDKPFRCSLCDRNFARSDHLSLHMKRHS 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 C2H2 Zn finger 265..287 CDD:275368 14/21 (67%)
COG5048 <270..362 CDD:227381 50/77 (65%)
C2H2 Zn finger 295..317 CDD:275368 14/21 (67%)
zf-H2C2_2 309..332 CDD:463886 13/22 (59%)
C2H2 Zn finger 325..345 CDD:275368 12/19 (63%)
klf-3NP_001022205.1 SFP1 <215..314 CDD:227516 54/99 (55%)
C2H2 Zn finger 235..254 CDD:275368 13/18 (72%)
C2H2 Zn finger 262..284 CDD:275368 14/21 (67%)
zf-H2C2_2 276..301 CDD:463886 14/24 (58%)
C2H2 Zn finger 292..312 CDD:275368 12/19 (63%)

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