DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cbt and sptf-3

DIOPT Version :10

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_493353.3 Gene:sptf-3 / 189783 WormBaseID:WBGene00012735 Length:412 Species:Caenorhabditis elegans


Alignment Length:8 Identity:4/8 - (50%)
Similarity:5/8 - (62%) Gaps:0/8 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 PLSTYLYN 114
            |...|:||
 Worm   131 PPPPYVYN 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 C2H2 Zn finger 265..287 CDD:275368
COG5048 <270..362 CDD:227381
C2H2 Zn finger 295..317 CDD:275368
zf-H2C2_2 309..332 CDD:463886
C2H2 Zn finger 325..345 CDD:275368
sptf-3NP_493353.3 COG5048 <311..406 CDD:227381
C2H2 Zn finger 318..338 CDD:275368
C2H2 Zn finger 346..368 CDD:275368
zf-H2C2_2 360..383 CDD:463886
C2H2 Zn finger 376..396 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.