DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and klu-1

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_493611.2 Gene:klu-1 / 173366 WormBaseID:WBGene00013970 Length:543 Species:Caenorhabditis elegans


Alignment Length:490 Identity:120/490 - (24%)
Similarity:190/490 - (38%) Gaps:124/490 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PSPPATPPLRENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNGGIITPN--PSDTEDEAPEIAV 70
            ||.||:|.:..:..|.:..|        |..:::|.:  ||.:...::||  .||....|     
 Worm    52 PSKPASPTMPLSPYEGITAD--------LMQRIQLFS--SQFDHARLSPNYATSDLGSSA----- 101

  Fly    71 PNKKPRLEQPAMSMTPPPDQKLD-DDQKAERVSVI-MRVNSSG---AVSSSSQDENSSSSTSCCS 130
               :........|.....|:.:| |:...|.:|.. ...|.||   ::|::|.:..|..:.|..|
 Worm   102 ---RSSFSSTTSSFLTYRDRSVDFDEAGKELISPFDCDTNCSGTPYSLSTNSGNHFSFEARSVSS 163

  Fly   131 SSSNT-------------------NTSTSSVPPTVEDDYPEAN-------VWRNL---KFKMNRK 166
            ...:|                   :.|.|.:.||.|||....|       ::...   ||....|
 Worm   164 LGHSTAHFNQLLAAGAAYELSRERSRSESDMQPTQEDDVRHLNTSTISVPIYAKKPLHKFGGEIK 228

  Fly   167 RAAEVALPPVQTPETPVAK--LVTPPAPAECIKEEEIKPILTPIYVSPVA-------SSASQLIL 222
            |::... ||.......|.:  |:.|.:..|..|:.|    .|..:||..|       .:|:...|
 Worm   229 RSSSTP-PPTSDEREQVEQRLLLRPSSGMEIKKDLE----TTNSFVSSWAREQIFAMQNATMYNL 288

  Fly   223 LSTVAAQ-----QSPTPVPKTP------------------------TMSEEKLTTRITAAQAAAT 258
            |:..:|:     .:|.|:...|                        |:..:........|:..|:
 Worm   289 LTARSAEDCSTISTPGPLKVFPRSKDDMTFAPRDDSSRAKQMQYPCTLCGQAFAVHDRLAKHIAS 353

  Fly   259 RSRIYECSFPD---------CGKNYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHK 314
            |.|...|:..|         |.|::.:|..|..|.|:|||.:|:.|  ..|::.|||||.||.|.
 Worm   354 RHRQRSCTLDDASKVHKCNMCSKSFSRSDMLTRHMRLHTGAKPYSC--PTCNQVFSRSDHLSTHL 416

  Fly   315 RTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKANGVN---RHVSLANNNTS------ASVAA 370
            |||||||.:.|.:|.....|.|.:|:|::.|:....:.::   ..:|:.:..||      .|.|.
 Worm   417 RTHTGEKPYACPMCNYSASRRDMISRHMRTHSLTDDSSISTPISQLSIRSATTSPLPPKIGSTAT 481

  Fly   371 SLCDASLHLRAIAPAGSSAS------SSPISSASL 399
            ....:.| |.|..|..|::|      |||..|.||
 Worm   482 VEIGSGL-LSAFKPILSASSSNLLSVSSPFQSLSL 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 8/32 (25%)
C2H2 Zn finger 265..287 CDD:275368 8/30 (27%)
COG5048 <270..362 CDD:227381 35/94 (37%)
zf-H2C2_2 279..306 CDD:290200 10/26 (38%)
C2H2 Zn finger 295..317 CDD:275368 11/21 (52%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
zf-C2H2 323..345 CDD:278523 6/21 (29%)
C2H2 Zn finger 325..345 CDD:275368 6/19 (32%)
klu-1NP_493611.2 C2H2 Zn finger 334..354 CDD:275368 3/19 (16%)
zf-C2H2 369..391 CDD:278523 6/21 (29%)
C2H2 Zn finger 371..391 CDD:275368 6/19 (32%)
zf-H2C2_2 383..408 CDD:290200 10/26 (38%)
COG5048 395..>448 CDD:227381 24/54 (44%)
C2H2 Zn finger 399..419 CDD:275368 11/21 (52%)
zf-H2C2_2 411..436 CDD:290200 12/24 (50%)
C2H2 Zn finger 427..447 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 74 1.000 Inparanoid score I3870
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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