DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and Egr4

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_065621.1 Gene:Egr4 / 13656 MGIID:99252 Length:478 Species:Mus musculus


Alignment Length:351 Identity:91/351 - (25%)
Similarity:131/351 - (37%) Gaps:89/351 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PEIAVPNKKPRLEQPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVSSSSQ------DENSSS 124
            |:::.|:.||.|.      .||....||                  |.:|:.:      :..|:.
Mouse   170 PQLSPPDVKPGLR------APPASPALD------------------AAASAFKGPYAPWELLSAG 210

  Fly   125 STSCCSSSSNTNTST----SSVPPTVED--------DYP-------EANVWRNLKFKMNRKRAAE 170
            ....|.|..:..|:.    |:|...|||        :.|       :|..:..............
Mouse   211 VPGNCGSQGSFQTTPEARFSAVGTKVEDLLSISCPAELPGPAARLYQAGAYDTFSLAPGDLGEGT 275

  Fly   171 VALPPVQTPETPVAK----------LVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILL-- 223
            ..||.:.||  |..:          |..|||.            |:|:.:...|::.....|:  
Mouse   276 EGLPALLTP--PGGEGGSGGEGGEFLAAPPAQ------------LSPLGLRGAATADFSKPLVAD 326

  Fly   224 ----STVAAQQSPT---PVPKTPTMSEE--KLTTRITAAQAAATRSRIYECSFPDCGKNYFKSSH 279
                |.|||..||.   |..|.......  |.:.|....:   ...:.:.|....|.:::.:|..
Mouse   327 LPGGSGVAAPSSPAASFPAAKARRKGRRGGKCSARCFCPR---PHVKAFACPVESCVRSFARSDE 388

  Fly   280 LKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKR 344
            |..|.|:|||.:||.|:  .|.:.|||||.|:.|.|||||||.|.|.||.::|.|||...:|.|.
Mouse   389 LNRHLRIHTGHKPFQCR--ICLRNFSRSDHLTTHVRTHTGEKPFACDVCGRRFARSDEKKRHSKV 451

  Fly   345 HNKDKANGVNRHVSLANNNTSASVAA 370
            |.|.||....|...|...:...|.||
Mouse   452 HLKQKARAEERLKGLGFYSLGLSFAA 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 6/23 (26%)
C2H2 Zn finger 265..287 CDD:275368 6/21 (29%)
COG5048 <270..362 CDD:227381 42/91 (46%)
zf-H2C2_2 279..306 CDD:290200 11/26 (42%)
C2H2 Zn finger 295..317 CDD:275368 10/21 (48%)
zf-H2C2_2 309..332 CDD:290200 13/22 (59%)
zf-C2H2 323..345 CDD:278523 10/21 (48%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
Egr4NP_065621.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..302 6/28 (21%)
zf-C2H2 372..396 CDD:278523 6/23 (26%)
C2H2 Zn finger 374..396 CDD:275368 6/21 (29%)
zf-H2C2_2 388..413 CDD:290200 11/26 (42%)
COG5048 400..>458 CDD:227381 31/59 (53%)
C2H2 Zn finger 404..424 CDD:275368 10/21 (48%)
zf-H2C2_2 416..441 CDD:290200 14/24 (58%)
C2H2 Zn finger 432..452 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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