DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cbt and Egr1

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_031939.1 Gene:Egr1 / 13653 MGIID:95295 Length:533 Species:Mus musculus


Alignment Length:414 Identity:112/414 - (27%)
Similarity:164/414 - (39%) Gaps:109/414 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NGGIITPNPSDTEDEAP----------EIAVPNKKPRLEQPAMSMT---------------PPPD 89
            |.|....||.....|.|          :||:.|:|..:|....|.|               |.|:
Mouse    77 NSGSSAFNPQGEPSEQPYEHLTTESFSDIALNNEKAMVETSYPSQTTRLPPITYTGRFSLEPAPN 141

  Fly    90 --QKLDDDQKAERVSVIMRVNSSGAVSSSSQDENSSSSTSC-------CSSSSNTNTSTSSVPPT 145
              ..|..:.....||.::.:.:....|||:....:|||:|.       |:..||.::...|..||
Mouse   142 SGNTLWPEPLFSLVSGLVSMTNPPTSSSSAPSPAASSSSSASQSPPLSCAVPSNDSSPIYSAAPT 206

  Fly   146 V----EDDYPEANVWRNLKFKMNRKRAAEVALPPVQTPET------PV------------AKLVT 188
            .    .|.:||.   ::..|..:...|.:  .||...|.|      |:            ..|.|
Mouse   207 FPTPNTDIFPEP---QSQAFPGSAGTALQ--YPPPAYPATKGGFQVPMIPDYLFPQQQGDLSLGT 266

  Fly   189 P-PAPAECIKEEEIKPILTPIYVSPVASSASQ-----LILLSTVAAQQ--SPTPVPKTPTMSEEK 245
            | ..|.:.::....:|.|||:  |.:.:.|:|     |..|:|....|  .|:.:.|.|....: 
Mouse   267 PDQKPFQGLENRTQQPSLTPL--STIKAFATQSGSQDLKALNTTYQSQLIKPSRMRKYPNRPSK- 328

  Fly   246 LTTRITAAQAAATRSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDEL 310
                      .....|.|.|....|.:.:.:|..|..|.|:|||::||.|:  .|.:.|||||.|
Mouse   329 ----------TPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRNFSRSDHL 381

  Fly   311 SRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKANGVNRHVSLANNNTSASVAASLCDA 375
            :.|.|||||||.|.|.:|.:||.|||...:|.|.|.:.|           :.....||.||    
Mouse   382 TTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK-----------DKKADKSVVAS---- 431

  Fly   376 SLHLRAIAPAGSSASS--SPISSA 397
                    ||.||.||  ||::::
Mouse   432 --------PAASSLSSYPSPVATS 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 7/23 (30%)
C2H2 Zn finger 265..287 CDD:275368 6/21 (29%)
COG5048 <270..362 CDD:227381 38/91 (42%)
zf-H2C2_2 279..306 CDD:290200 11/26 (42%)
C2H2 Zn finger 295..317 CDD:275368 10/21 (48%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
zf-C2H2 323..345 CDD:278523 10/21 (48%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
Egr1NP_031939.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94 5/16 (31%)
DUF3446 132..207 CDD:288757 17/74 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..237 20/80 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..336 4/30 (13%)
zf-C2H2 336..360 CDD:278523 7/23 (30%)
C2H2 Zn finger 338..360 CDD:275368 6/21 (29%)
zf-H2C2_2 352..377 CDD:290200 11/26 (42%)
COG5048 363..>421 CDD:227381 30/70 (43%)
C2H2 Zn finger 368..388 CDD:275368 10/21 (48%)
zf-H2C2_2 380..405 CDD:290200 14/24 (58%)
C2H2 Zn finger 396..416 CDD:275368 9/19 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 407..478 17/64 (27%)
DUF3432 426..520 CDD:288743 12/34 (35%)
BES1_N <441..478 CDD:283367 2/7 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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