DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and klf3

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_571934.3 Gene:klf3 / 117603 ZFINID:ZDB-GENE-011116-1 Length:328 Species:Danio rerio


Alignment Length:346 Identity:104/346 - (30%)
Similarity:151/346 - (43%) Gaps:87/346 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KSQKNGGIITPNPSDTEDEAPEIAVPNKKPRLEQPAMSMTPPPDQKLDDDQ-KAERVSVIMRVNS 109
            ||.:..|::.| |:       .::..:..|....|:..:.....|..|..| :.|.|.:.:...|
Zfish    21 KSHETFGMVLP-PA-------VVSGAHLYPSHYHPSYQLPYSHRQSQDVHQAQIEPVDLSIGNKS 77

  Fly   110 SGAVSSSSQDENSSSSTSCCSSSSNTNTSTSSVPPTVEDDYPEANVWRNLKFKMNRKRAAEVALP 174
            ||          ||.|:|..|||...:      ||:..:.:..|:     :...||:.:..:.||
Zfish    78 SG----------SSPSSSLASSSPRAS------PPSPYEAHSPAS-----RCSQNRQLSPSLTLP 121

  Fly   175 -PVQTPETPVAKLVTP-----------PAPAECIKEEEIKPILTP-IYVSPVA------------ 214
             |.      |.:::||           |.|...:....:.  |:| |.:|||.            
Zfish   122 IPA------VTQVLTPFVSSPGMIPVIPMPLSVLYPPSLH--LSPSIIISPVTPEDPANHKHFSV 178

  Fly   215 ----SSASQLILLSTVAAQQSPTPVPKTPTMSEEKLTTRITA---------AQAAATRS------ 260
                :::....||..:.::  |.|.......|:||  :.|||         .|:....|      
Zfish   179 IKSENTSDHHELLKPIKSE--PHPEHTQDNHSQEK--SVITALPNYNDRGNTQSPKVESPDLLKK 239

  Fly   261 -RIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQ 324
             ||:.|.|..|.|.|.||||||||:|.||||:|:.|.||.|..:|:|||||:||.|.|||.|.|.
Zfish   240 RRIHRCDFNGCNKVYTKSSHLKAHRRTHTGEKPYKCMWEGCTWKFARSDELTRHYRKHTGVKPFH 304

  Fly   325 CSVCQKKFMRSDHLSKHVKRH 345
            |..|.:.|.|||||:.|.|||
Zfish   305 CPDCDRTFSRSDHLALHKKRH 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 14/23 (61%)
C2H2 Zn finger 265..287 CDD:275368 14/21 (67%)
COG5048 <270..362 CDD:227381 47/76 (62%)
zf-H2C2_2 279..306 CDD:290200 16/26 (62%)
C2H2 Zn finger 295..317 CDD:275368 13/21 (62%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
zf-C2H2 323..345 CDD:278523 11/21 (52%)
C2H2 Zn finger 325..345 CDD:275368 10/19 (53%)
klf3NP_571934.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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